Pairwise Alignments

Query, 177 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 171 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 48.1 bits (113), Expect = 8e-11
 Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 9/147 (6%)

Query: 10  LFNRLSDLLGLLSSILFILLVAN----VVYDVVMRYAFNDVSIAFQELEWHLFATVFLLG 65
           + +R  + L  ++  + ILL+A     V  +VV+RY  ND  +  +E+  HL      LG
Sbjct: 1   MIDRFENALVAVNRWVLILLLAAMSVIVFANVVLRYTTNDSIVWAEEVARHLMIWGTFLG 60

Query: 66  IPYAIKAGGHVRVDLFYERLSMKAQAVIDILGTLFFLLPFCLLVVYFGIDFAKESYALGE 125
               ++ GGHV +D  ++ +      V+  +  +  +  FC+ + YF I +      +  
Sbjct: 61  AGLVLRFGGHVAIDNLHQAVPTPLARVLRAV-VVLLIAGFCVSMTYFSIVYTS---VMRF 116

Query: 126 TSGDPGGLPYRWIIKAMIPLSFTFMAI 152
            +    G+ + WI  A +P  F  M +
Sbjct: 117 QTTPATGISFAWIY-AALPAGFMLMLV 142