Pairwise Alignments

Query, 177 a.a., C4-dicarboxylate ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 160 a.a., TRAP-type C4-dicarboxylate transport system, small permease component from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 47.4 bits (111), Expect = 1e-10
 Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)

Query: 10  LFNRLSDLLGLLSSILFILLVANVVYDVVMRYAFNDVSIAFQELEWHLFATVFLLGIPYA 69
           L N L+ +L     I+  ++VA V + V  R+ FN  S    E    LF  + LLG  Y 
Sbjct: 4   LTNALNKILAGCCCIILAVMVACVSWQVAARFIFNAPSSTLDEFTQILFMWMILLGGVYT 63

Query: 70  IKAGGHVRVDLFYERLSMKAQAVIDILGTLFFLLPFCLLVVYFGIDFAKESYALGETSGD 129
                H+ +DL  ++LS     ++D +  +   +   + +VY G    +++  + + S  
Sbjct: 64  AGLKKHLAIDLLAQKLSRTPALMLDSIIQVIITVFALIFMVYGGDIIVEKAAHVSQMSP- 122

Query: 130 PGGLPYRWIIKAMIPLSFTFMAISGVGLIIHSLNKVFN 167
                   ++K  +   +  M ISGV L+ +++  V +
Sbjct: 123 --------VLKWPMDKVYWVMPISGVILVYYTIVNVID 152