Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., Solute-binding protein from Xanthobacter sp. DMC5

 Score = 77.4 bits (189), Expect = 5e-19
 Identities = 80/342 (23%), Positives = 151/342 (44%), Gaps = 30/342 (8%)

Query: 18  RVMKRSVLLIAAGVAL-------LTTSAFAEEKVYRLTLAETWGPNFPIFGDTTKNMAAM 70
           R+  R+V L  +G+AL       L  SA        L  A+     +P   D+ K    +
Sbjct: 6   RLTSRAVALTLSGLALSGLALSGLALSALPAMAQTTLRSADIHPDGYPTV-DSVKYFGEI 64

Query: 71  AEKMSNGRLQIRIDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFG 130
            EK SNG+ ++++ S+ +        +  + G  D+    +  +   +P T     MPF 
Sbjct: 65  IEKKSNGKYKVQVFSSGQLGGEKDTIEQTRFGVIDLNRVNTAPFNNLIPETAVL-GMPFL 123

Query: 131 MTTGEQYAWFYHGGGMELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMR 190
             + +       G     + K + PH ++     ++  +     +K I +++D++G+K+R
Sbjct: 124 FRSTDHMYKVVDGPIGAEIAKAFEPHGLVVLGFFDSGARSMYNSKKPIKTLDDMKGMKIR 183

Query: 191 IPG---FAGEVLAELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYYY 247
           +     F G + A LGA  T +  GELY++L+   +D  E   PS D  +  +++A YY 
Sbjct: 184 VQQSDLFIGMINA-LGANATPMPFGELYSALQTGLVDGAENNYPSYD-SVKHYEVAKYYS 241

Query: 248 TGWHEPATELQFLVNQKTWDKLPEDLREILRVAMRTAAYDMYVQSVHESGKNWVSITQEF 307
              H  A E+ F+++++ +DKL  D +++ + A         +Q+  +  + W     E 
Sbjct: 242 LTEHSLAPEV-FVMSKRAFDKLSPDDQKMFKEA--------GLQATQKMRELWAKRDAEA 292

Query: 308 PDVKVK-------TFPAPVIKALREVNDRLLAKHAAEDPLAK 342
            D  VK           P I A++ V D+ +     +D +A+
Sbjct: 293 KDRVVKGGAIINEVDKKPFIDAMKPVYDKFVTTDKMKDLVAR 334