Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., TRAP-type C4-dicarboxylate transport system, periplasmic component from Variovorax sp. SCN45

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 70/268 (26%), Positives = 118/268 (44%), Gaps = 15/268 (5%)

Query: 20  MKRSVLLIAAGVALLTTSAFAEEKVYRLTLAETWGPNFPIFGDTTKNMAAMAEKMSNGRL 79
           MK+   LIA G+  LT S     + +R   AE    +FP      K M     K + G+ 
Sbjct: 6   MKKLSGLIAIGLIALTASNVTTARTFRS--AEVHAKDFPT-NQAVKFMGDELSKATGGKD 62

Query: 80  QIRIDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAW 139
            I+I + +   +     + VK G  DM   +S  + G VP ++   S+PF     E +  
Sbjct: 63  NIKIFADSSLGSEKDTVEQVKIGALDMVRVSSASFHGIVPESV-IPSLPFLFRDIEHFRK 121

Query: 140 FYHGGGMELMEKVYSPHNMLS---FPGGNTDVQMGGWFQKEINSVEDLQGLKMRIP--GF 194
             +G   + +   +     +    +  G   V    + +K I SV D++GLK+R+     
Sbjct: 122 AMYGPTGDKVLAAFEKAGFIGLCMYESGARSV----YAKKPIKSVADMKGLKIRVQPSDL 177

Query: 195 AGEVLAELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYYYTGWHEPA 254
              +++  GA PT +   E+YT L+   +DA E   PS +    F + AP Y    H   
Sbjct: 178 MVSLVSAAGASPTPMPIAEVYTGLKTGLVDAAENNYPSYEEAKHF-EAAPVYSETMHVMT 236

Query: 255 TELQFLVNQKTWDKLPEDLREILRVAMR 282
            E+  + ++K WD L ++ +  +R A +
Sbjct: 237 PEV-LVFSKKIWDTLTKEEQAAIRKAAK 263