Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 371 a.a., TRAP-type C4-dicarboxylate transport system from Magnetospirillum magneticum AMB-1

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 23/198 (11%)

Query: 92  PLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGMTT---GEQYAWFYHGGGMEL 148
           P  + D V++G  D+  +A  Y  G+ P  +    +PF +     G +  W Y+    + 
Sbjct: 98  PSQLVDQVRNGVADIVWTAPGYSAGRFP-AIEALELPFMVANALDGSRMTWDYYN---QF 153

Query: 149 MEKVYSPHNMLSFPGGNTDVQMGGWFQK---EINSVEDLQGLKMRIPG-FAGEVLAELGA 204
            +  ++ + +L+       +  GG F     E+ S+ +++GLK+R P   A + L  LG 
Sbjct: 154 AKDEFAAYKVLA-----VHIDGGGLFHTANTEVKSLAEVKGLKLRTPTRLAAKTLQSLGG 208

Query: 205 KPTNIAPGELYTSLERRTIDA--LEW--VGPSLDLRMGFHKIAPYYYTGWHEP-ATELQF 259
            P ++ P ++  ++ +  +D   L W  + P+    +  + IAP    G   P AT L  
Sbjct: 209 VPVSMPPSQVADAIAKGVVDGGLLPWELMRPTKIDEVTKYHIAPP--PGRPFPVATVLSV 266

Query: 260 LVNQKTWDKLPEDLREIL 277
           L+N+  +D LP DL+ ++
Sbjct: 267 LMNKAKYDSLPADLKAVI 284