Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 370 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

 Score =  189 bits (479), Expect = 1e-52
 Identities = 108/341 (31%), Positives = 173/341 (50%), Gaps = 4/341 (1%)

Query: 28  AAGVALLTTSAFAEEKV-YRLTLAETWGPNFPIFGDTTKNMAAMAEKMSNGRLQIRIDSA 86
           AA  + L T A A+     R  L   +  N          MA     M+ G+  I++  A
Sbjct: 20  AAAASTLATPAIAQSSPSVRWRLTSGFPNNLDTIYGGAVVMANALRAMTGGKFDIQVFQA 79

Query: 87  NKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAWFYHGGGM 146
            +        D VK+   ++ H+  YY+ GK P     +++PFG+   +Q AW YHGGG 
Sbjct: 80  GEIVPGAQAIDAVKANTVEISHTCGYYFTGKDPTFAIGSTIPFGLNARQQNAWLYHGGGN 139

Query: 147 ELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAELGAKP 206
               +  S + ++  PGG T  QMGGW++KEI  +ED++GLKMRI G AG+VLA+LGA P
Sbjct: 140 GAYNEFLSDYGVIGIPGGATGAQMGGWYRKEIKGIEDIKGLKMRIAGVAGQVLAKLGAVP 199

Query: 207 TNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAP-YYYTGWHEPATELQFLVNQKT 265
             +  G++Y +LER TIDA EWVGP  D ++GF++IAP YYY  + E    + F VN+  
Sbjct: 200 QQLPGGDIYPALERGTIDAAEWVGPYDDEKLGFYQIAPYYYYPAFWEGGLTIHFFVNKDQ 259

Query: 266 WDKLPEDLREILRVAMRTAAYDMYVQSVHESGKNWVSITQEFPDVKVKTFPAPVIKALRE 325
           +  LP++ +  L  A + A  +M  Q++++        +      +++  P  V+ A  +
Sbjct: 260 YAALPDEYKAALDTACKAANINM--QALYDVKNKDAIRSLVSKGTQLRPLPRDVLDAAYK 317

Query: 326 VNDRLLAKHAAEDPLAKEIQESQANYLKQTRSWTDISLRAY 366
               L  ++  + P   +I      +  ++  W  ++   Y
Sbjct: 318 ATFELYDEYTQKYPAWAKIYPGWKTFRDESYEWFRVAEYTY 358