Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., periplasmic mannitol-binding protein from Agrobacterium fabrum C58

 Score =  193 bits (490), Expect = 7e-54
 Identities = 113/345 (32%), Positives = 180/345 (52%), Gaps = 5/345 (1%)

Query: 20  MKRSVLLIAAGVALLTTSAFAEEKVYRLTLAETWGPNFPIFGDTTKNMAAMAEKMSNGRL 79
           MK+  L  AA  AL   +   +       L  ++  +        +++A      ++G  
Sbjct: 7   MKKGALAGAAATALAAPAIAQQNTKINWRLTSSFPKSLDTIYGGAEDIAKHVAAATDGNF 66

Query: 80  QIRIDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAW 139
            I+  +A +    L   D V SG  +M H+ SYY+ GK P     T++PFG+      +W
Sbjct: 67  TIQPFAAGEIVPGLQAADAVSSGTVEMCHTCSYYYVGKDPTFAIGTAIPFGLNARLTNSW 126

Query: 140 FYHGGGMELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVL 199
           FY G G +L+ + Y+ HN+     GNT  QMGGWF+KEIN+V+D +G+KMRI G AG+V+
Sbjct: 127 FYEGNGNKLLNEFYAKHNLYGMISGNTGAQMGGWFRKEINTVDDFKGVKMRIAGLAGKVV 186

Query: 200 AELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAP-YYYTGWHEPATELQ 258
            +LG  P  IA G++Y +LE+ TIDA EWVGP  D ++GF K+A  YYY  + E    + 
Sbjct: 187 EKLGVVPQQIAGGDIYPALEKGTIDAAEWVGPYDDHKLGFQKVAKYYYYPAFWEGGPVIH 246

Query: 259 FLVNQKTWDKLPEDLREILRVAMRTAAYDMYVQSVHESGKNWVSITQEFPDVKV-KTFPA 317
             VN   W+ LP++ + +L+ A   A   M  +      KN ++I Q   +  V + F  
Sbjct: 247 SFVNLDKWNSLPKNYQMVLQDACAFANTSMMAK---YDAKNPIAIKQLVSEGAVLRPFSQ 303

Query: 318 PVIKALREVNDRLLAKHAAEDPLAKEIQESQANYLKQTRSWTDIS 362
            +++A  +    + A  +A +P  K+I E Q  + ++   W  ++
Sbjct: 304 EILEACYKAALEVYANISASNPDFKKIYEDQVAFKREGYLWMQLA 348