Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., C4-dicarboxylate-binding protein from Agrobacterium fabrum C58

 Score = 67.4 bits (163), Expect = 5e-16
 Identities = 72/305 (23%), Positives = 136/305 (44%), Gaps = 17/305 (5%)

Query: 23  SVLLIAAGVALLTTSAFAEEKVYRLTLAETWGPNFPIFGDTTKNMAAMAEKMSNGRLQIR 82
           S++ +A G+AL   SA A+E   R   A+     +P   +  K M  +  + S GR++I+
Sbjct: 6   SMMCVAMGIALSGVSASAQEITLRS--ADIHPDGYPTV-EAVKYMGELLAERSKGRIKIQ 62

Query: 83  IDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAWFYH 142
           + + +         +  + G  DM    +  +   V  T     +PF   + E       
Sbjct: 63  VMNNSVLGGEKDTIEQTRFGVIDMNRVNAAPFNNLVKETTVL-GLPFLFRSTEHMHNTVD 121

Query: 143 GGGMELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMRIP--GFAGEVLA 200
           G   + +   + PH ++     ++  +     +K I  + DL+GLK+R+        ++ 
Sbjct: 122 GPIGDEVLAAFEPHGLIGLAFYDSGARSFYTTKKPIEKLADLKGLKIRVQQSDLWISMMQ 181

Query: 201 ELGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAPYYYTGWHEPATELQFL 260
             GA PT +  GE+Y+SLE   +D  E   PS +     +++A  Y    H    E+  +
Sbjct: 182 AFGANPTPMPMGEVYSSLETGVVDGAENNWPSYE-SARHYEVAKNYSLTEHSLNPEI-LV 239

Query: 261 VNQKTWDKLPEDLREILRVAMRTAAYDMYVQSVHESGKNWVSITQEFPDVKVKTFPAPVI 320
           +++ ++DKL  + +++LR A +         SV +  + W S  ++  + KV+   A VI
Sbjct: 240 ISKISYDKLSPEDQKLLRQAAK--------DSVGKMRELW-SAREKASEEKVRAGGANVI 290

Query: 321 KALRE 325
           K  +E
Sbjct: 291 KVNKE 295