Pairwise Alignments

Query, 372 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

 Score =  188 bits (478), Expect = 2e-52
 Identities = 116/346 (33%), Positives = 183/346 (52%), Gaps = 10/346 (2%)

Query: 27  IAAGVAL--LTTSAFAEEK---VYRLTLAETWGPNFPIFGDTTKNMAAMAEKMSNGRLQI 81
           + AGV    L   A A+E     +R+T + T G +  +FG   + +A   ++ S G   I
Sbjct: 13  VGAGVTATALAAPAIAQENPKITWRMTSSFTKGLDI-LFG-AGQIVADHVKEASGGNFVI 70

Query: 82  RIDSANKHKAPLGVFDMVKSGQYDMGHSASYYWKGKVPNTLYFTSMPFGMTTGEQYAWFY 141
           +  +  +    L   D V +G  +M H+ SYY+ GK P     TS+PFG+   +  AWF 
Sbjct: 71  QHFAGGEIVPALQAADAVTAGTVEMAHTCSYYYVGKDPTFALGTSVPFGLNARQTNAWFN 130

Query: 142 HGGGMELMEKVYSPHNMLSFPGGNTDVQMGGWFQKEINSVEDLQGLKMRIPGFAGEVLAE 201
             GG EL+ +  + HN+ S   GNT  QMGGWF+KEIN+++DL+GLKMRI G  G+V+ +
Sbjct: 131 QAGGNELLNEFLAQHNIYSILLGNTGAQMGGWFRKEINTIDDLKGLKMRIAGLTGQVMQK 190

Query: 202 LGAKPTNIAPGELYTSLERRTIDALEWVGPSLDLRMGFHKIAP-YYYTGWHEPATELQFL 260
           +G  P  IA G++Y +LE+ TIDA E+VGP  D ++GF+K+A  YYY  W E    +   
Sbjct: 191 VGVTPQQIAGGDVYAALEKGTIDATEFVGPYDDQKLGFYKVAKYYYYPAWWEGGPAVHAF 250

Query: 261 VNQKTWDKLPEDLREILRVAMRTAAYDMYVQSVHESGKNWVSITQEFPDVKVKTFPAPVI 320
           VN + ++ LPE+ + IL+ A    +  M  +    + K    +  +     ++ F   ++
Sbjct: 251 VNLQKFNDLPENYKRILKDACAAGSASMLERYDARNPKALKELVAQ--GAILRPFSQEIL 308

Query: 321 KALREVNDRLLAKHAAEDPLAKEIQESQANYLKQTRSWTDISLRAY 366
               +      A+ +A++   K+I ESQ  + K    W  I+   Y
Sbjct: 309 DVCHKAAQDTYAEISAKNESFKKIYESQQAFKKDAYLWAQIAEYTY 354