Pairwise Alignments

Query, 524 a.a., murein L,D-transpeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., hypothetical protein from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  192 bits (489), Expect = 2e-53
 Identities = 113/334 (33%), Positives = 184/334 (55%), Gaps = 24/334 (7%)

Query: 198 ERLKRPGDPLSHREALVQRLALVNLDTTSILNDVAYYDASLEKPIKQFQKMHGLQTDGVI 257
           ++L + GD  +    + +RL L     TS    +  +D  LE+ +K FQ +HGL+ DG++
Sbjct: 245 QKLLQKGDTAAAVLTVRKRLNLNQRLNTSDKR-LRVFDDKLEQQVKHFQMLHGLKEDGIV 303

Query: 258 GPQTMKWLNTSVTERLALLALNAERIRLWPTQQ------DSMIVVNVPGFDMKYWD---- 307
           G  T+  +N  V++R+  + +N ER R  P +          I VN+P + +  ++    
Sbjct: 304 GGNTLATMNIPVSDRINQIMINMERWRWIPKRMVPKSLDQKYIWVNIPEYKLYVYEDPND 363

Query: 308 ---AGRE---VFESKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDS 361
              A RE   V E +V+VGKT   TP+ + KL+ +++ P WNVP+ I+ ++I P + ++ 
Sbjct: 364 DLVAEREYKKVKEMRVIVGKTMNSTPIFSDKLEYVVMAPYWNVPNSIVEKEIKPHMLKNP 423

Query: 362 EYLANHHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSR 421
            +LA+ +ME++    +P  + P  I+W  V    F YR+RQ+ G  N+LG  KF  PN  
Sbjct: 424 GWLASQNMEVVTKEKNPRTVSPYSINWSGVTASNFSYRVRQKPGPDNSLGMIKFLFPNEY 483

Query: 422 AIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPVSTQA------ 475
           A+YLHDTP+  LF+   R FS GC+RVE     AQ LL +     +    +T        
Sbjct: 484 AVYLHDTPADALFSQNDRDFSHGCVRVEKPVDLAQYLLQDMPEWDEQRIRNTMRGGDETW 543

Query: 476 IALKKRIPVHIIYQTVWYE-EGVLHYRDDIYHYD 508
           + L KR+ V+++Y T W + +G +H+R+DIY +D
Sbjct: 544 VTLPKRVQVYLVYFTSWVDKDGQIHFREDIYGHD 577