Pairwise Alignments

Query, 524 a.a., murein L,D-transpeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 570 a.a., Uncharacterized protein conserved in bacteria from Kangiella aquimarina DSM 16071

 Score =  194 bits (493), Expect = 7e-54
 Identities = 131/420 (31%), Positives = 209/420 (49%), Gaps = 25/420 (5%)

Query: 103 EYDVLATDTLLQYLSYAEQAPKVGIAWFFEGQLDQPLAPPSEEAQLALHMAIGNQSLARL 162
           E D+L +D +L  LS   Q  KV      +   D  +  P+      L  A    SL   
Sbjct: 145 ECDLLQSDAILT-LSQHLQIGKVNPNQLLK---DTEVGKPTTNLSDLLTRAASMPSLFDY 200

Query: 163 MDEYTPQDPAYQQL---LQAYQSLSSIEFNEVALYEQMERLKRPGDPLSHR-EALVQRLA 218
             E  P    Y  L   L   +S ++ ++ E+ L   ++        + HR  A+ +RL 
Sbjct: 201 FKEIEPHSQDYTGLRNYLSELRSRNAPQWPEIELQPSIKP-----QMIDHRLVAIAERLM 255

Query: 219 L---VNLDTTSILNDVAYYDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLAL 275
               +  D + +      Y+  L + ++ FQK HGL+ DGV+G +T+  LN +  +R+  
Sbjct: 256 FWGDLPSDWSYLAPSPMVYEDDLIRAVEHFQKRHGLEADGVLGKKTIAALNITPQQRIEQ 315

Query: 276 LALNAERIRLWPTQQ-DSMIVVNVPGFDMKYWDAGREVFESKVVVGKTTRPTPVMNTKLD 334
           L +N E+IR    +  + +I VN+P F++       E     V+VG+  R TP+   K+ 
Sbjct: 316 LVVNLEQIRWHELKPANRLIKVNIPSFELVALINNEEQLRMPVIVGQLERQTPIFEDKIQ 375

Query: 335 SLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEAVEPE 394
            L++NP W VP ++  +D LP+++ + +YL ++   +    +D ++ DP  IDW+ V   
Sbjct: 376 YLVLNPNWVVPWELATKDKLPLIQENPQYLLDNRFSVYL--NDFKIEDPMQIDWKQVTKS 433

Query: 395 TFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKF 454
            FPYRL Q+ G  NALG  KF  PN+  +YLHDTP+K LF N  RAFSSGCIRV+   + 
Sbjct: 434 RFPYRLVQEPGADNALGQVKFMFPNNYEVYLHDTPAKSLFKNDIRAFSSGCIRVQEPMEL 493

Query: 455 AQTLLANQGITLDDF-----PVSTQAIALKKRIPVHIIYQTV-WYEEGVLHYRDDIYHYD 508
              +L   G++  D         T  ++L   +P+ + Y+T  W  +  + +R DIY  D
Sbjct: 494 LWWILRTNGLSDTDIENQLNKKHTNTVSLPLPVPIRLEYRTAYWGLDQTIQFRTDIYQRD 553