Pairwise Alignments

Query, 524 a.a., murein L,D-transpeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 615 a.a., L,D-transpeptidase from Escherichia coli ECRC62

 Score =  263 bits (672), Expect = 1e-74
 Identities = 164/525 (31%), Positives = 258/525 (49%), Gaps = 52/525 (9%)

Query: 31  IDSTSPVNEQITNPALVEQIYHSNNDQLLWSDLATANHFEAQLEVIHRASFSPLFSRQLF 90
           I+S  P   +      ++ +Y + + Q +W +      F+ QL  +  A F P F++ + 
Sbjct: 78  IESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVE 137

Query: 91  ALKSYRQQDRWHEYDVLATDTLLQYLSYAEQAPKVGIAWFFEGQLDQPLAPPSEEAQLAL 150
            L            DV+ +D ++ YL +    P  G  W +  +    LA P        
Sbjct: 138 LLTDPGVNGMAR--DVVLSDAMMGYLHFIANIPVKGTRWLYSSK-PYALATPPLSVINQW 194

Query: 151 HMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIE-----------------FNEV-A 192
            +A+    L   +    PQ P Y  + ++  +L S                    N+V A
Sbjct: 195 QLALDKGQLPTFVAGLAPQHPQYAAMHESLLALLSDTKPWPQLTGKATLRPGQWSNDVPA 254

Query: 193 LYEQMER---------LKRPGDPLSHREALVQRLALVNLDTTSILNDV------------ 231
           L E ++R         +  PGD       +      V    T  ++              
Sbjct: 255 LREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMDKQMTSRSKPAPAVR 314

Query: 232 AYYDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQD 291
           A YD  L + +K+FQ   GL  DG IGP T  WLN +  +R  +LALN +R+RL PT+  
Sbjct: 315 AAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELS 374

Query: 292 SMIVVNVPGFDMKYWDAGREVFESKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMVE 351
           + I+VN+P + + Y+  G +V +S+V+VG+  R TP+M++ L+++++NP WNVP  +  +
Sbjct: 375 TGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARK 434

Query: 352 DILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNALG 411
           DILP V+ D  YL +H   ++RGW+  E IDP  +DW  +     P+R +Q  G +N+LG
Sbjct: 435 DILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLG 494

Query: 412 TYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFPV 471
            YKFN P+S AIYLHDTP+ +LF   +RA SSGC+RV  A   A  LL + G   +D  +
Sbjct: 495 RYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAG--WNDKRI 552

Query: 472 S-------TQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYD 508
           S       T+ + +++ IPV++ Y T +   +G   YR DIY+YD
Sbjct: 553 SDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597