Pairwise Alignments

Query, 524 a.a., murein L,D-transpeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., Uncharacterized protein conserved in bacteria from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  194 bits (492), Expect = 9e-54
 Identities = 117/364 (32%), Positives = 191/364 (52%), Gaps = 18/364 (4%)

Query: 158 SLARLMDEYTPQDPAYQQLLQAYQSL--SSIEFNEVAL-YEQMERLKRPGDPLSHREALV 214
           S+  L+++  PQ+  Y  L  A +SL     +F +  + Y+    +    + +     ++
Sbjct: 161 SIRELLEDLRPQNTLYDGLRSALESLLNEKSDFGDTPIHYDGALEVSDRAEVILQVRRVL 220

Query: 215 QRLALVNLDTTSILNDVAYYDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLA 274
           + +    L   S       YD  L   +K+FQK HGL+ DGV+G    + +N S  + + 
Sbjct: 221 EAMGEQGL---SQAEQPQVYDEDLANAVKRFQKRHGLKEDGVLGEDFWRAINYSKEDLMV 277

Query: 275 LLALNAERIRLWP---TQQDSMIVVNVPGFDMKYWDAGREVFESKVVVGKTTRPTPVMNT 331
            L +N ER+R  P   +Q+   ++VN+P + M Y      VF ++ VVGK    TPV   
Sbjct: 278 KLKVNLERLRWLPDFLSQEGPKVLVNIPNYYMDYVVDQDTVFSTRAVVGKEYYQTPVFAA 337

Query: 332 KLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEAV 391
           K++ L+ +P WN+P  I+  + +P + +D  YL+ HHME++    + + IDP+ I W+ +
Sbjct: 338 KMNYLVFSPYWNLPEGILWAETIPAILKDKNYLSAHHMEVVD--KEGQRIDPSNISWKKL 395

Query: 392 EPET-FPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVEN 450
           + E  FPY +RQ+ G +NALG  KF  PN+  IY+HD+P+K LF+   RAFS GCIR+ +
Sbjct: 396 KKEEGFPYLIRQRPGDENALGRVKFMFPNTYNIYIHDSPAKALFDRDERAFSHGCIRIAD 455

Query: 451 AEKFAQTLLANQGITLDDFPVSTQAIALKKRI------PVHIIYQTVWYEEGVLHYRDDI 504
            + FA  LL +      D   +   +  +K++       V I+Y T W     L  R+D+
Sbjct: 456 PDGFAAVLLKDDQEWGKDSIANAMKLEEEKQVNLAVKPSVWILYLTAWKSAEGLQLREDV 515

Query: 505 YHYD 508
           Y  D
Sbjct: 516 YGSD 519