Pairwise Alignments

Query, 524 a.a., murein L,D-transpeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., Uncharacterized protein conserved in bacteria from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  192 bits (487), Expect = 3e-53
 Identities = 107/287 (37%), Positives = 166/287 (57%), Gaps = 13/287 (4%)

Query: 233 YYDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQ--Q 290
           +YD++L + +K+FQK +GL  DGVIG  T   LN      +  +A+N ER+R  P    +
Sbjct: 256 HYDSALFEGVKRFQKRNGLDADGVIGKDTYTALNEDPASLIQKVAVNMERLRWLPDTVLE 315

Query: 291 DSMIVVNVPGFDMKYW-DAGRE-VFESKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKI 348
              ++VN+  F + Y  D G + VF S+V+VG+    TPV N ++  ++++PTW VP  I
Sbjct: 316 GRFVMVNIANFQLDYLQDNGLDTVFTSRVIVGREYHTTPVFNGEMAYIVLSPTWTVPSSI 375

Query: 349 MVEDILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQN 408
           +  +++P +K+D  YL+ +H++I+  ++  EV  P+ IDW       FPY +RQ +G  N
Sbjct: 376 IRREMIPKIKKDVSYLSRNHLKILT-YAGKEV-SPSSIDWSKASGGNFPYMIRQSSGAFN 433

Query: 409 ALGTYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLAN------Q 462
           +LG  KF  PN   +Y+HDTP+K LF+   RAFS GCIR++   +FA  LL +      +
Sbjct: 434 SLGQAKFIFPNKHNVYIHDTPTKSLFSRDVRAFSHGCIRIQKPAEFAAVLLEDDPKWDME 493

Query: 463 GITLDDFPVSTQAIALKKRIPVHIIYQTVWYE-EGVLHYRDDIYHYD 508
            I         + + LKK++PV +IY T W +  G  + R DIY  D
Sbjct: 494 RIREGMNSGQEKTVMLKKKVPVVLIYLTFWADPAGKAYLRKDIYERD 540