Pairwise Alignments

Query, 524 a.a., murein L,D-transpeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., L,D-transpeptidase family protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  153 bits (386), Expect = 2e-41
 Identities = 122/383 (31%), Positives = 176/383 (45%), Gaps = 53/383 (13%)

Query: 153 AIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIEFNEVALYEQMERLKR-----PGDPL 207
           A+    L +  D   P D  YQ L   Y     + +  +A      R  +     PG+  
Sbjct: 152 ALTRNVLGQWYDGLAPTDIGYQNLSAGY-----VRYRRLAAQGGWPRFTQGATIEPGNSD 206

Query: 208 SHREALVQRLA----LVNLDTTSILNDVAYYDASLEKPIKQFQKMHGLQTDGVIGPQTMK 263
               AL+ RL     L   D   + +    Y+A L++ ++ FQ  HGL  DG IG  T +
Sbjct: 207 RRIPALIDRLTAEGDLSAADGARLKSQGLVYNAELQRAVQSFQNRHGLGADGRIGAGTQR 266

Query: 264 WLNTSVTERLALLALNAERIRLWPTQQ--DSMIVVNVPGFDMKYWDAGREVFESKVVVGK 321
            L  S  +R   +ALN ER R W  ++     I VN     M YW  G+ V  ++VVVG 
Sbjct: 267 SLGASAEDRARQIALNLER-RRWLKREVAPERIEVNTAAAIMVYWKDGKPVHSNRVVVGS 325

Query: 322 TTRPTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDPEVI 381
               TP +     S++ NP W VP  I   +ILP   +   YLA + M +     D  VI
Sbjct: 326 AENQTPSLEKPFASVVANPPWYVPAGIARREILP---KGPGYLAANDMYV----KDGTVI 378

Query: 382 DPALIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNASRAF 441
                               Q+AG ++ALG  KF   +S AI+LHDTPSK  FN ++R  
Sbjct: 379 --------------------QRAGPRSALGYVKFELRDSYAIFLHDTPSKAAFNLSTRQR 418

Query: 442 SSGCIRVENAEKFAQTLLANQGITLDDFPVS-----TQAIALKKRIPVHIIYQTVWYE-E 495
           S GC+RV+NA +FA+ LL+     L  F  +     T  +   + I V ++Y T + + +
Sbjct: 419 SHGCVRVQNAVEFARLLLSPDPAKLAQFDTAQDTRETTRVTTGREISVRLLYWTAFVDGQ 478

Query: 496 GVLHYRDDIYHYD---ALALGNG 515
           G + +R+D+Y  D   A ALG G
Sbjct: 479 GRVAFREDVYGRDDKLAQALGIG 501