Pairwise Alignments

Query, 524 a.a., murein L,D-transpeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 615 a.a., murein L,D-transpeptidase from Escherichia coli BL21

 Score =  263 bits (671), Expect = 2e-74
 Identities = 167/526 (31%), Positives = 264/526 (50%), Gaps = 54/526 (10%)

Query: 31  IDSTSPVNEQITNPALVEQIYHSNNDQLLWSDLATANHFEAQLEVIHRASFSPLFSRQLF 90
           I+S  P   +      ++ +Y + + Q +W +      F+ QL  +  A F P F++ + 
Sbjct: 78  IESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVE 137

Query: 91  ALKSYRQQDRWHEYDVLATDTLLQYLSYAEQAPKVGIAWFFEGQLDQPLAPPSEEAQLAL 150
            L            DV+ +D ++ YL +    P  G  W +  +    LA P        
Sbjct: 138 LLTDPGVNGMAR--DVVLSDAMMGYLHFIANIPVKGTRWLYSSK-PYALATPPLSVINQW 194

Query: 151 HMAIGNQSLARLMDEYTPQDPAYQQLLQAYQSLSSIE-----------------FNEV-A 192
            +A+    L   +    PQ P Y  + ++  +L                      N+V A
Sbjct: 195 QLALDKGQLPTFVAGLAPQHPQYAAMHESLLALLCDTKPWPQLTGKATLRPGQWSNDVPA 254

Query: 193 LYEQMER---------LKRPGDPLSHREALVQRLAL---------VNLDTTSILNDV--- 231
           L E ++R         +  PGD  +  +A+V   A+         ++  TTS        
Sbjct: 255 LREILQRTGMLDGGPKITLPGDD-TPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAV 313

Query: 232 -AYYDASLEKPIKQFQKMHGLQTDGVIGPQTMKWLNTSVTERLALLALNAERIRLWPTQQ 290
            A YD  L + +K+FQ   GL  DG IGP T  WLN +  +R  +LALN +R+RL PT+ 
Sbjct: 314 RAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTEL 373

Query: 291 DSMIVVNVPGFDMKYWDAGREVFESKVVVGKTTRPTPVMNTKLDSLIINPTWNVPHKIMV 350
            + I+VN+P + + Y+  G +V +S+V+VG+  R TP+M++ L+++++NP WNVP  +  
Sbjct: 374 STGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLAR 433

Query: 351 EDILPMVKRDSEYLANHHMEIIRGWSDPEVIDPALIDWEAVEPETFPYRLRQQAGVQNAL 410
           +DILP V+ D  YL +H   ++RGW+  E IDP  +DW  +     P+R +Q  G +N+L
Sbjct: 434 KDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSL 493

Query: 411 GTYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSGCIRVENAEKFAQTLLANQGITLDDFP 470
           G YKFN P+S AIYLHDTP+ +LF   +RA SSGC+RV  A   A  LL + G   +D  
Sbjct: 494 GRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAG--WNDKR 551

Query: 471 VS-------TQAIALKKRIPVHIIYQTVWY-EEGVLHYRDDIYHYD 508
           +S       T+ + +++ IPV++ Y T +   +G   YR DIY+YD
Sbjct: 552 ISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYD 597