Pairwise Alignments

Query, 524 a.a., murein L,D-transpeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  145 bits (367), Expect = 3e-39
 Identities = 101/309 (32%), Positives = 155/309 (50%), Gaps = 17/309 (5%)

Query: 206 PLSHREALVQRLALVNLDTTSILNDVAYYDASLEKPIKQFQKMHGLQTDGVIGPQTMKWL 265
           PL+ R   V R  L+ +   S       ++  +E  ++ FQ   GLQ DG +G  T + +
Sbjct: 127 PLADRVGKVSR-RLIEMGFLSADKWTDSFNDDVETAVRAFQLAEGLQPDGKVGEVTRQAM 185

Query: 266 NTSVTERLALLALNAERIRLWPTQ-QDSMIVVNVPGFDMKYWDAGREVFESKVVVGKTTR 324
           + +  + +ALL   A  +R       D+ I+VN+PG  +   + GR  F  + VVG+ +R
Sbjct: 186 DRTPAQTVALLRRAAAAMRAQQASIPDTTILVNLPGQSVTLIEHGRPAFTMRAVVGRPSR 245

Query: 325 PTPVMNTKLDSLIINPTWNVPHKIMVEDILPMVKRDSEYLANHHMEIIRGWSDPEVIDPA 384
            TP++  K+ S+ INPTW VP  ++ ED LP +++       +    + G    EV +  
Sbjct: 246 KTPLLQDKVTSVTINPTWTVPPTVLSEDKLPALRKKGTTGIKNAAVYLDG---SEVANTQ 302

Query: 385 LIDWEAVEPETFPYRLRQQAGVQNALGTYKFNTPNSRAIYLHDTPSKHLFNNASRAFSSG 444
            ++W +V+P     R+ Q+ G  NALG ++FN  N   I+LH T    LF+   RA SSG
Sbjct: 303 SVNWWSVDPGR--VRIVQRPGDDNALGRFRFNLTNGDGIFLHGTNDPRLFSRDLRAASSG 360

Query: 445 CIRVENAEKFAQTLL-------ANQGITLDDFPVSTQAIALKKRIPVHIIYQTVWYE-EG 496
           C+R+E+A   A+TLL       A  G  LD     T+ I L   IPV  +Y     +  G
Sbjct: 361 CVRLEDARMMAETLLGAAKVTPAGIGQQLD--TGETKTIRLPNAIPVRFVYWNASVDTAG 418

Query: 497 VLHYRDDIY 505
           V+    DIY
Sbjct: 419 VVRVHPDIY 427