Pairwise Alignments

Query, 404 a.a., sugar efflux transporter SetB from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., MFS transporter from Pseudomonas simiae WCS417

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 76/338 (22%), Positives = 136/338 (40%), Gaps = 30/338 (8%)

Query: 32  IVEALDAS--PMQLSLYMVLAVVSSVIVSQWLARQSDRHWQRKTIL----LVSLICYLIT 85
           +  A DAS   +Q  +   L  +++VIVS    R  DR  +R+++L    L ++ C L  
Sbjct: 33  LTRAFDASFHAVQWVVLAYLLAITAVIVSA--GRLGDRFGRRRSLLAGLLLFAVACGLCG 90

Query: 86  VVSFMFIRSYSLAIMVVVLFASVSGASFGQLFALGREYADQHLTDKTTFLSTMRAGIAIA 145
           + S       SLA ++        GA+     ALG              +  +    A+ 
Sbjct: 91  MAS-------SLAWLIAARVLQGLGAAVMMAMALGMVGDTVTKARTGRVMGLLGTMSAVG 143

Query: 146 WVFGPPAAFMLKASFGFNAAFAVSALIVFLGIVLIARFLPAG---VKTASAVGTTPVELG 202
              GP    +L + +G+ A F V   +  + + L   +LP      ++++  G  P    
Sbjct: 144 TAMGPSVGGVLLSVWGWRAIFLVGVPLGLVAVALACCYLPVDRPHARSSAGSGFWPSLKD 203

Query: 203 QYSPRKRALIVLYCVTLVCTFGSNNLYITSMPLYLSRELMVPEHWLGLLFGTAALCEIPV 262
                   +  L    ++ TF          P YLSR L +   W+GL+           
Sbjct: 204 ASLRTGLVMSALVAAVIMATFVVG-------PFYLSRGLGLDPEWMGLVMAVGPCVAAIT 256

Query: 263 MLMAGKLAERWGTNKLLMFGITSGILFYGVMLTHTG---FVAMMAAQVLNGFFIGVCATL 319
            + AG+L +R G+ ++ + G+  G++  G +L       FV + A  +L   +    A  
Sbjct: 257 GVPAGRLTDRLGSPRMTLAGL--GMMACGALLLSCAWGLFVYLGALVILTTGYSLFQAAN 314

Query: 320 GMVVLQDMMQDRLGTASTLFSSMLSISTLVASLSVGVV 357
              V+ D+   R GT S L +   ++  +V + ++G V
Sbjct: 315 NTAVMGDVEGARRGTVSGLLNLSRNLGLIVGAWALGAV 352