Pairwise Alignments

Query, 404 a.a., sugar efflux transporter SetB from Vibrio cholerae E7946 ATCC 55056

Subject, 392 a.a., broad specificity sugar efflux system (NCBI) from Escherichia coli BW25113

 Score =  229 bits (583), Expect = 1e-64
 Identities = 126/374 (33%), Positives = 205/374 (54%), Gaps = 5/374 (1%)

Query: 10  FIMSTLVTGLCGAFFYPLSSLFIVEALDASPMQLSLYMVLAVVSSVIVSQWLARQSDRHW 69
           F++   + G+ GA   P  SLF+   + A P  + L+  +  ++ + VS WLA++SD   
Sbjct: 18  FMLVAFMMGVAGALQAPTLSLFLSREVGAQPFWIGLFYTVNAIAGIGVSLWLAKRSDSQG 77

Query: 70  QRKTILLVSLICYLITVVSFMFIRSYSLAIMVVVLFASVSGASFGQLFALGREYADQHLT 129
            R+ +++   +  +   + F F R Y   I   VL AS++  +  QLFAL REYAD    
Sbjct: 78  DRRKLIIFCCLMAIGNALLFAFNRHYLTLITCGVLLASLANTAMPQLFALAREYADNSAR 137

Query: 130 DKTTFLSTMRAGIAIAWVFGPPAAFMLKASFGFNAAFAVSALIVFLGIVLIARFLPAGVK 189
           +   F S MRA +++AWV GPP AFML  ++GF   F+++A I  L +VLIA  LP+  +
Sbjct: 138 EVVMFSSVMRAQLSLAWVIGPPLAFMLALNYGFTVMFSIAAGIFTLSLVLIAFMLPSVAR 197

Query: 190 T-ASAVGTTPVELGQYSPRKRALIVLYCVTLVCTFGSNNLYITSMPLYLSRELMVPEHWL 248
               +     ++ G      R L V   +   C    N +YI  MPL++S EL +P+   
Sbjct: 198 VELPSENALSMQGGWQDSNVRMLFVASTLMWTC----NTMYIIDMPLWISSELGLPDKLA 253

Query: 249 GLLFGTAALCEIPVMLMAGKLAERWGTNKLLMFGITSGILFYGVMLTHTGFVAMMAAQVL 308
           G L GTAA  EIP M++AG   +R+G  ++++  + +G+LFY  ++     +A+M  Q+ 
Sbjct: 254 GFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVAAGVLFYTGLIFFNSRMALMTLQLF 313

Query: 309 NGFFIGVCATLGMVVLQDMMQDRLGTASTLFSSMLSISTLVASLSVGVVGEFYNYFSTLY 368
           N  FIG+ A +GM+  QD+M  R G A+TLF++ +S   ++A +  G + + + +F+  +
Sbjct: 314 NAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVIQGAIAQSWGHFAVYW 373

Query: 369 VSLTGAFSALLLLA 382
           V    +  AL L A
Sbjct: 374 VIAVISVVALFLTA 387