Pairwise Alignments

Query, 404 a.a., sugar efflux transporter SetB from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., lactose/glucose efflux system (NCBI) from Escherichia coli BW25113

 Score =  218 bits (555), Expect = 2e-61
 Identities = 118/378 (31%), Positives = 208/378 (55%), Gaps = 4/378 (1%)

Query: 4   DKTALLFIMSTLVTGLCGAFFYPLSSLFIVEALDASPMQLSLYMVLAVVSSVIVSQWLAR 63
           D T+  F++   +TG+ GA   P  S+F+ + + A P  +  +   + V  ++VSQ+LA 
Sbjct: 14  DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAG 73

Query: 64  QSDRHWQRKTILLVSLICYLITVVSFMFIRSYSLAIMVVVLFASVSGASFGQLFALGREY 123
           +SD+   RK++++   +  ++    F + R+Y + + V V  +S    +  Q+FAL RE+
Sbjct: 74  RSDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREH 133

Query: 124 ADQHLTDKTTFLSTMRAGIAIAWVFGPPAAFMLKASFGFNAAFAVSALIVFLGIVLIARF 183
           AD+   +   F S +RA +++AWV GPP A+ L   F F   +  +A+   +  V++  F
Sbjct: 134 ADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLF 193

Query: 184 LPAGVKTASAVGTTPVELGQYSPRKRALIVLYCVTLVCTFGSNNLYITSMPLYLSRELMV 243
           LP+ ++    + T  +E  + + R   L+ + C  +   +GSN+LYI +MPL++  EL +
Sbjct: 194 LPS-MRKELPLATGTIEAPRRNRRDTLLLFVICTLM---WGSNSLYIINMPLFIINELHL 249

Query: 244 PEHWLGLLFGTAALCEIPVMLMAGKLAERWGTNKLLMFGITSGILFYGVMLTHTGFVAMM 303
           PE   G++ GTAA  EIP ML+AG  A+R G   L+      G+ FY  ML     V ++
Sbjct: 250 PEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVGGVCFYAGMLMAHSPVILL 309

Query: 304 AAQVLNGFFIGVCATLGMVVLQDMMQDRLGTASTLFSSMLSISTLVASLSVGVVGEFYNY 363
             Q+LN  FIG+   +GM+  QD+M  + G+A+TL+++   +  ++A    G+V E +NY
Sbjct: 310 GLQLLNAIFIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSVAGIVAEIWNY 369

Query: 364 FSTLYVSLTGAFSALLLL 381
            +  + ++    + L  L
Sbjct: 370 HAVFWFAMVMIIATLFCL 387