Pairwise Alignments

Query, 404 a.a., sugar efflux transporter SetB from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., MFS permease from Agrobacterium fabrum C58

 Score =  125 bits (315), Expect = 2e-33
 Identities = 89/385 (23%), Positives = 182/385 (47%), Gaps = 15/385 (3%)

Query: 4   DKTALLFIMSTLVTGLCGAFFYPLSSLFIVEALDASPMQLSLYMVLAVVSSVIVSQWLAR 63
           D+ A L  +   + G   A   P    +I++ L   P  L LY V A+V+S+I S++   
Sbjct: 29  DRQAYLIALLVFIAGSTNAAVVPFIGFYIIQVLGHPPATLGLYSVTAMVASIIASRFYGE 88

Query: 64  QSDRHWQRKTILLVSLICYLITVVSFMFIRSYSLAIMVVVLFASV--SGASFGQLFALGR 121
           + D   + + +LL+S+    +   +     S  LA++V V    +  S A+   +F+ GR
Sbjct: 89  RVDAGVRVRPLLLLSVFGAFVAAAA---ATSGHLALLVAVTATGMGLSNAASTLIFSYGR 145

Query: 122 EYADQHLTDKTTFLSTMRAGIAIAWVFGPPAAFMLKASFGFNAAFAVSALIVFLGIVLIA 181
            Y   +  D  ++ + +R  +++AW+  P AA+++    G  A F  + ++  +   L  
Sbjct: 146 YYGRVNALDAPSYNAVLRTMVSLAWMLLPAAAYLILDFAGAKAVFINAMMMAAIWAGLAL 205

Query: 182 RFLPAGVKTASAVGTTPVEL---GQYSPRKRALIVLYCVTLVCTFGSNNLYITSMPLYLS 238
             +P G        T P+E    G    R+   +++      C   ++ L  +++P++L 
Sbjct: 206 AIVPRGQ-------TCPMERRADGDADTRRNLPLLMAAAASFCMSFAHALCASALPVFLV 258

Query: 239 RELMVPEHWLGLLFGTAALCEIPVMLMAGKLAERWGTNKLLMFGITSGILFYGVMLTHTG 298
           RE+ +P++  GL        E+ ++L+A ++  R     LL       I+ + ++ +   
Sbjct: 259 REVGLPDYVPGLSLSVKCAMEVLLILLAPRIMRRVSARILLGVSAVMAIIAFNIIASVQT 318

Query: 299 FVAMMAAQVLNGFFIGVCATLGMVVLQDMMQDRLGTASTLFSSMLSISTLVASLSVGVVG 358
             AM+    + G + G+CA   +  +Q   + R   A+ L+ + + ++ L A   +G V 
Sbjct: 319 LPAMLFGAAMEGAYYGLCAGTCLTFVQGFARGRTARATALYMNSIFLAGLFAVPLMGFVS 378

Query: 359 EFYNYFSTLYVSLTGAFSALLLLAL 383
           ++ ++ +++ ++  GA +ALLLL L
Sbjct: 379 QYASFGTSIRLASVGAGAALLLLFL 403