Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  107 bits (268), Expect = 3e-28
 Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 11/267 (4%)

Query: 30  FSCP---WHYHTEYELVLYQNPDQRFVGNYFAGDAIGAVEHNTLLLYGPGLPHMIAGRQL 86
           F CP   WH+H EYEL L         G  F GD IG     +L L GP LPH    +  
Sbjct: 30  FPCPLVRWHFHKEYELHLIVASS----GKVFIGDYIGNFYPESLFLTGPNLPHNWISQVE 85

Query: 87  INKAQTLHSTIIWFKQEWLDKLQSVLPQAQALQRLQQHASYGVRLS-EQTATRVAELLAN 145
            ++       ++ F  E  +    +  + + L  L + A YG+    ++T  +   L+  
Sbjct: 86  EDEVVPKRDMLVNFTDELFEGGSQIFAELKTLAPLLERAQYGIEFRCKRTINQAMTLMQR 145

Query: 146 VDQQPHSYQSLRVIESLLVMADDAQAQRLSVAPYVMTALTSNSDTHKKIQLAKQYVEQHY 205
           ++      +       L  ++     Q LS A    T   ++  +  +   A  Y+  HY
Sbjct: 146 IEDAQGMARLGHFFILLEALSACEDYQLLSGAT---TPQLADEHSIDRTNRAVDYIFAHY 202

Query: 206 AQAIKITDLCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACELLASSALPIALIAE 265
           A+ + + ++   L +  +   R+F++  G +F E + + RI K+CELLA     +  +  
Sbjct: 203 ARELPLEEVAEYLGMKPTYFSRVFKQATGRTFIEFVNRLRISKSCELLADGDKAVTDVCF 262

Query: 266 RTGFGNLSNFNRQFKTLKTMTPREFRQ 292
            +GF N+SNFNR+F+ LK MTP  +R+
Sbjct: 263 ESGFNNISNFNRRFQQLKGMTPSHYRR 289