Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., Transcriptional regulator of various polyols utilization, AraC family from Variovorax sp. SCN45

 Score =  103 bits (256), Expect = 7e-27
 Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 11/263 (4%)

Query: 34  WHYHTEYELVLYQNPDQRFVGNYFAGDAIGAVEHNTLLLYGPGLPHMIAGRQLINKAQTL 93
           WH+H +YEL L         G  F GD IG  +   L+L GP LPH      +       
Sbjct: 53  WHFHEDYELHLITETS----GKAFIGDWIGPFQPGHLVLCGPRLPHNWISLDVPEGGAAG 108

Query: 94  HSTIIWFKQEWLDKLQSVLPQAQALQRLQQHASYGVRLSEQTATRVAELLANVDQQPHSY 153
              +I F+ E ++   + +P+ + + +L + A +G+     +     +  A+ D+   + 
Sbjct: 109 RDRVIQFRHEPIESAAAGIPELREVMQLLERARHGIEFFGMSQ----QAQAHWDRIKAAR 164

Query: 154 QSLRVIESLLVMADDAQAQRLSVAPYVMTALTSNSDTHKKIQLAKQYVEQ---HYAQAIK 210
              R+   L  MAD AQ     +   V       +D   ++      V +   + A  I 
Sbjct: 165 GVRRLGLFLDFMADLAQCTDYRLLSSVQMQGAQGADGDAQVDQINGIVNRITNNMADPIS 224

Query: 211 ITDLCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACELLASSALPIALIAERTGFG 270
           ++D+  +L +SES   R F +  G SF++ + + RI  AC LL  +   +  I  + GF 
Sbjct: 225 MSDVAAELGMSESRFSRFFRRSTGNSFTDFVNRVRINSACHLLMQTDHYVTDICYQVGFN 284

Query: 271 NLSNFNRQFKTLKTMTPREFRQR 293
           N++NFNR+F  +K MTP EFR++
Sbjct: 285 NVANFNRRFLEIKGMTPSEFRRQ 307