Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., Transcriptional regulator of various polyols utilization, AraC family from Variovorax sp. SCN45

 Score =  115 bits (288), Expect = 1e-30
 Identities = 82/268 (30%), Positives = 126/268 (47%), Gaps = 13/268 (4%)

Query: 30  FSCPWHYHTEYELVLYQNPDQRFVGNYFAGDAIGAVEHNTLLLYGPGLPHMIAGRQLINK 89
           F C WHYH EYEL        R  G+ F GD IG  E   + L G  LPH      +  +
Sbjct: 42  FDC-WHYHDEYELQCIN----RSSGDAFVGDHIGRFEPGYVALVGARLPHTWISHDVPPE 96

Query: 90  AQTLHSTIIWFKQEWLDKLQSVLPQAQALQRLQQHASYGVRLSEQTATRVAELLANVDQQ 149
                S +I F+ E L K   + P+ +A+  +   A  G+      A  V E    V  +
Sbjct: 97  GIAERSMVIHFRDEPLRKGTDLFPELKAVLPMLDRAKLGIEFFGIHAL-VRERFLQVQAK 155

Query: 150 PHSYQSLRVIESLLVMADDAQAQRLSVAPYVMTALTSNSDTHKKIQLAK--QYVEQHYAQ 207
               +    I  L  +A     +++S      TA  +  D     ++ +   Y++QH  +
Sbjct: 156 EGMARLAEFIGLLHELARWPDWRQIS-----STAEPAGEDPSANTRMRRVLDYLDQHLTE 210

Query: 208 AIKITDLCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACELLASSALPIALIAERT 267
            + +  +C   +++ESS  R F KH G +F++ + + RI KACE+L +S   ++ I    
Sbjct: 211 ELSLPAVCAVANMAESSFSRYFHKHMGATFTDFVTRLRIAKACEMLQTSDRLVSDICYEV 270

Query: 268 GFGNLSNFNRQFKTLKTMTPREFRQRFQ 295
           GF NL+NFNR+F  LK MTP  +R + Q
Sbjct: 271 GFANLANFNRRFLQLKGMTPSAYRYQAQ 298