Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., AraC-type DNA-binding domain-containing proteins from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 91.7 bits (226), Expect = 2e-23
 Identities = 80/290 (27%), Positives = 124/290 (42%), Gaps = 24/290 (8%)

Query: 9   MSGISQDWVLREFRS----KSQTQEFSCPWHYHTEYELVLYQNPDQRFVGNYFAGDAIGA 64
           M  I Q    +EF+S       T  F  PWH H E E++  Q       G    GD +G 
Sbjct: 1   MKPIVQKLPRQEFKSFVSITMSTPIFETPWHRHIENEILYIQEGH----GTAIIGDFVGE 56

Query: 65  VEHNTLLLYGPGLPHMIAGRQLINKAQTLHSTIIWFKQEWLDKLQSVLPQ---AQALQRL 121
                L   G  +PH     Q   K       +I F Q    +    LP+    + L RL
Sbjct: 57  FSPGDLFYIGSNVPHWFRKAQ---KDIFCTVVVIQFDQAIFGQTFLKLPEMAKVRQLIRL 113

Query: 122 QQHASYGVRLSEQTATRVAELLANVDQQPHSYQSLRVIESLLVMADDAQAQRLSVAPYVM 181
           +Q  + G    E+    +  L+  V+  PH    L ++  +   +   Q   L+  P   
Sbjct: 114 KQGMAVGYAGQEEIIGSIKRLV-EVEGFPHISTLLDILHQI---SSHTQNSLLTHEPI-- 167

Query: 182 TALTSNSDTHKKIQLAKQYVEQHYAQAIKITDLCHQLHLSESSAYRLFEKHYGMSFSEHL 241
                + D+   I    +Y  +H+ + I++ ++     +S S+  R F+ +   SFS  L
Sbjct: 168 ----DSFDSKGIIDEVLEYTFEHFQENIRVEEVAAIAKMSTSNFRRFFKLNTKKSFSGFL 223

Query: 242 KQFRIGKACELLASSALPIALIAERTGFGNLSNFNRQFKTLKTMTPREFR 291
           K+ RI  AC+LL      I+ I  + GF N++NFNRQFK +K +TP  +R
Sbjct: 224 KEIRIAHACKLLKDKNTFISQIFHQCGFRNITNFNRQFKEIKGVTPTAYR 273