Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., Carnitine catabolism transcriptional activator from Alteromonas macleodii MIT1002

 Score = 64.3 bits (155), Expect = 3e-15
 Identities = 32/98 (32%), Positives = 57/98 (58%)

Query: 197 AKQYVEQHYAQAIKITDLCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACELLASS 256
           A+ Y+  HY+Q I ++DL     +S+ +  R F +  GMS  ++L++ R+  AC+ +  S
Sbjct: 218 AQNYLANHYSQPISLSDLASHTFVSQRTLQRRFTQALGMSVIDYLQKLRLHHACQQIEVS 277

Query: 257 ALPIALIAERTGFGNLSNFNRQFKTLKTMTPREFRQRF 294
              IA IA   G+ N++ F + F+    ++P E+R+RF
Sbjct: 278 TRSIADIAFNVGYQNVNAFRKIFRKEYGLSPVEYRKRF 315



 Score = 26.9 bits (58), Expect = 6e-04
 Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 18/119 (15%)

Query: 129 VRLSEQTATRVAELLANVDQQPHSYQSLRVIESLLVMADDAQAQRLSVAPYVMTALTSNS 188
           V+     A   ++ ++  D   H++ S R ++         QA  +SV  Y+        
Sbjct: 216 VKAQNYLANHYSQPISLSDLASHTFVSQRTLQRRFT-----QALGMSVIDYLQKL----- 265

Query: 189 DTHKKIQLAKQYVEQHYAQAIKITDLCHQLHLSESSAYR-LFEKHYGMSFSEHLKQFRI 246
               ++  A Q +E        I D+   +     +A+R +F K YG+S  E+ K+F I
Sbjct: 266 ----RLHHACQQIE---VSTRSIADIAFNVGYQNVNAFRKIFRKEYGLSPVEYRKRFAI 317