Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score =  105 bits (261), Expect = 2e-27
 Identities = 72/264 (27%), Positives = 123/264 (46%), Gaps = 8/264 (3%)

Query: 34  WHYHTEYELVLYQNPDQRFVGNYFAGDAIGAVEHNTLLLYGPGLPHMIAGRQLINKAQTL 93
           WHYH EYE+ L         G ++ GD +G      L++ GP LP         ++    
Sbjct: 30  WHYHPEYEIHLVVATS----GTFYIGDFVGRFSPGQLIMTGPNLPQNWISEIEPDEIVPT 85

Query: 94  HSTIIWFKQEWLDKLQSVLPQAQALQRLQQHASYGVRLSEQTATRVAELLANVDQQPHSY 153
            S +I F + +++   + + +   ++ L   +  G+   ++T+ RV  L+  + +     
Sbjct: 86  RSLVIQFPESFIEDACTSMAEMDVVRALLDRSRRGILFDDETSDRVRPLVLRLIEAQGLT 145

Query: 154 QSLRVIESLLVMADDAQAQRLSVAPYVMTALTSNSDTHKKIQLAKQYVEQHYAQAIKITD 213
           +     E L ++ +   ++ L+   Y +  LT   D+   I  A  ++ QH  + ++  D
Sbjct: 146 RLALFWEILDLLVNAPSSEVLASLSYELD-LTGIGDSG--INRALSHLRQHLTEQVEEID 202

Query: 214 LCHQLHLSESSAYRLFEKHYGMSFSEHLKQFRIGKACE-LLASSALPIALIAERTGFGNL 272
           L   +  S S+  R F++H G +   +  Q RI  AC+ LLA   + +A +    GF NL
Sbjct: 203 LADMVGQSPSAFSRAFKRHTGTTLVRYRNQLRIDLACQMLLADQDVKVAEVCYDVGFSNL 262

Query: 273 SNFNRQFKTLKTMTPREFRQRFQA 296
           SNFNR F  LK M+P  FR  F A
Sbjct: 263 SNFNRHFLKLKGMSPSRFRTIFAA 286