Pairwise Alignments

Query, 299 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score =  158 bits (399), Expect = 2e-43
 Identities = 95/294 (32%), Positives = 150/294 (51%), Gaps = 11/294 (3%)

Query: 1   MRPLIENVMSGISQDWVLREFRSKSQTQEFSCPWHYHTEYELVLYQNPDQRFVGNYFAGD 60
           M P  E V     + W+L + R      EF   WHYH E+EL L  N      G  F GD
Sbjct: 1   MEPWFEAVSVPADRSWLLFDRR----LPEFPFNWHYHPEFELTLTLNS----AGMRFVGD 52

Query: 61  AIGAVEHNTLLLYGPGLPHMIAGRQLINKAQTLHSTIIWFKQEWLDKLQSVLPQAQALQR 120
           ++       L+L GP LPH      LIN      + + WF ++W++ L ++ P+  A+  
Sbjct: 53  SVENYGDGDLVLLGPNLPHAWQSHGLINAPGVHRAVVCWFTRDWIEGLIALTPELSAITP 112

Query: 121 LQQHASYGVRLSEQTATRVAELLANVDQQPHSYQSLRVIESLLVMADDAQAQRLSVAPYV 180
           L   + +G+   E    +V E LA + +     Q L ++  L+ +A  +  + LS     
Sbjct: 113 LLVESGHGICFGEDALAKVGERLATLHKIAPEQQILTLLGVLVDLARVSDRRPLSAGE-- 170

Query: 181 MTALTSNSDTHKKIQLAKQYVEQHYAQAIKITDLCHQLHLSESSAYRLFEKHYGMSFSEH 240
           +TA T+  D   ++Q    ++  HY   I I  L    HLS+S   RLF++   M+ S++
Sbjct: 171 VTASTAPRD-RARMQRVLNHIHAHYIGTISIKPLSEIAHLSDSQLQRLFKRSTRMTISQY 229

Query: 241 LKQFRIGKACELLASSALPIALIAERTGFGNLSNFNRQFKTLKTMTPREFRQRF 294
           + Q R+G AC LLA + L +A IAE TGF + ++F+RQF+  + MTP ++R++F
Sbjct: 230 IGQLRVGGACRLLAQTDLSLARIAEETGFSDAAHFSRQFRAARGMTPGDYRRQF 283