Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 919 a.a., DNA gyrase subunit A from Xanthobacter sp. DMC5

 Score =  851 bits (2199), Expect = 0.0
 Identities = 463/933 (49%), Positives = 617/933 (66%), Gaps = 91/933 (9%)

Query: 7   EITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKS 66
           +I PV+I +EL  SYLDYAMSVIV RALPDVRDGLKPVHRR+LF+M+  G +WNK Y+KS
Sbjct: 16  DIRPVSITEELSRSYLDYAMSVIVARALPDVRDGLKPVHRRILFSMHENGYEWNKQYRKS 75

Query: 67  ARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVR 126
           ARVVGDVIGKYHPHGD +VYD +VRMAQ F++R  LVDGQGNFGS+DGD+ AAMRYTEVR
Sbjct: 76  ARVVGDVIGKYHPHGDQSVYDALVRMAQTFAMRVPLVDGQGNFGSVDGDAPAAMRYTEVR 135

Query: 127 MSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHN 186
           + K+ + LL DLDKETVD+  NYD +E  P VLP K PNLL+NGA GIAVGMATNIPPHN
Sbjct: 136 LEKVTNTLLDDLDKETVDFQDNYDNSEHEPTVLPAKFPNLLVNGAGGIAVGMATNIPPHN 195

Query: 187 LGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSKA 246
           LGE+ID  +A +D+  +  + L+D +PGPDFPT ALI GR GI  AY TGRG + MR+K 
Sbjct: 196 LGEIIDVTVALLDDPLLEPEALLDLLPGPDFPTGALILGRTGIRQAYLTGRGSILMRAKV 255

Query: 247 EIETDKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIEC 306
            IE  +  +E +IV+EIPYQVNKA +IEKIAELV++K+VEGIS +RDESD+DGMR+VIE 
Sbjct: 256 AIEHIRKDREALIVTEIPYQVNKATMIEKIAELVRDKRVEGISEIRDESDRDGMRVVIEI 315

Query: 307 KRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTI 366
           KRDA  +VVLNNLY  T LQT+FG+NMVAL  G+P +  L ++L  F+  R EV++RRT 
Sbjct: 316 KRDAQADVVLNNLYRLTLLQTSFGVNMVALSGGKPGILTLHDVLTAFIAFREEVISRRTK 375

Query: 367 FELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLERA 426
           F LRKAR+RAH+L GLA+A+ANIDE+I LIR A  PA A+E L+ R W   ++A ++   
Sbjct: 376 FLLRKARDRAHVLVGLAIAVANIDEVIRLIRTAPDPATARESLMGRDWPAKDMAPLIALI 435

Query: 427 GTDAARPEWLEPQYGIR-DGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIA 485
                     +P++ ++ DG Y L+E QA+AILDLRL +LT L  ++I +E  +L  EIA
Sbjct: 436 A---------DPRHKLKEDGTYRLSEVQARAILDLRLQRLTALGRDEIAEELDKLAAEIA 486

Query: 486 ALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVVTLSHE 545
             + ILAS  R+  +IR+EL AI+A F   RRTEI     D++ E+LI RE++VVT+SH 
Sbjct: 487 DYLEILASRPRMRAIIRDELLAIKAEFGTPRRTEIVEGFGDLEDEDLIQREEMVVTVSHA 546

Query: 546 GYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVYQ 605
           GY+K   LS Y AQRRGGKG+SA + ++ED++ RL VA+TH  +L FS++G+ Y+MKV++
Sbjct: 547 GYIKRVPLSTYRAQRRGGKGRSAMQTRDEDFVTRLFVASTHAPVLFFSSKGQVYKMKVWR 606

Query: 606 LPLASRTARGKPIVNLLPLEENERITAI--LPVTEFSEDKF-IFMATGDGTVKKTSLDQF 662
           LPLA+  ARGK ++N+LPLE++ERIT++  LP  E    +  I  AT  GTV++ +L  F
Sbjct: 607 LPLAAPQARGKALINILPLEQDERITSVVLLPEDEGENQRLQIMFATTGGTVRRNALTDF 666

Query: 663 ANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQPVL 722
             V  NG IA+ L + +++  V +   E +++L +  G  +RF  +E             
Sbjct: 667 QQVNRNGKIAMKLAEGEAIADVGLCTEEDDVLLTTAAGACIRFPVTEVRL---------- 716

Query: 723 DENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSL-IVPKTEGD-------------- 767
                    FK     GR + GVRG++L + D V+S+ I+   E D              
Sbjct: 717 ---------FK-----GRDSVGVRGIRLEESDSVISMAIIRHVEADAEQRLAYIKMRRAL 762

Query: 768 ------------------------------------VLTVTENGYGKRTSLSEYPTKGRG 791
                                               +LTV+ENGYGKRTS  EY   GRG
Sbjct: 763 RGEAGESAEVEQEEGASGSGQLSQERYAEMGAKEQFILTVSENGYGKRTSSYEYRVTGRG 822

Query: 792 TQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIRT 851
            +G+V++ V+ERNG +V +  V + D+ M++T+ G L+R  V  +  VGR +QGV +  T
Sbjct: 823 GKGIVAMAVNERNGRLVASFPVEDADQIMLVTDGGQLIRCPVDGIRIVGRASQGVIVFDT 882

Query: 852 SEGESVVGLQRIDEIEESELPEGEEALVENDAP 884
           +EGE VV ++ I E   +E   GE  +   DAP
Sbjct: 883 AEGERVVSVEHISEDTGAEGEAGESGV---DAP 912