Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 917 a.a., DNA topoisomerase IV from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  163 bits (413), Expect = 4e-44
 Identities = 108/352 (30%), Positives = 184/352 (52%), Gaps = 30/352 (8%)

Query: 21  YLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKSARVVGDVIGKYHPH 80
           +LDYA  VI+ RA+P + DGLKPV RR+L AM  + +     + K A V+G  + +YHPH
Sbjct: 44  FLDYASYVILERAVPAIEDGLKPVQRRILHAMREMDDG---RFNKVANVIGQTM-QYHPH 99

Query: 81  GDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSI-DGDSAAAMRYTEVRMSKIAHELLADLD 139
           GD+++ D +V + Q    + +L++ QGN+G    GDSAAA RY E R+SK A +++   +
Sbjct: 100 GDASIGDAMVNLGQ----KDLLIETQGNWGDARTGDSAAAPRYIEARLSKFALDVV--FN 153

Query: 140 KETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHNLGEVIDGCLAYID 199
            +T  +  +YDG +  P  LP K P LL  G  GIAVG++T I PHN  E+I   +  + 
Sbjct: 154 PQTTLWQLSYDGRKNEPVTLPVKFPLLLAQGVEGIAVGLSTKIMPHNFRELIKASVDVLK 213

Query: 200 NEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSKAEIETDKNGKETII 259
             +  +  L D++ G          G++G         G++ +R+  E    K  K  ++
Sbjct: 214 GRSTNL--LPDFLTGGQIDVTNYNGGQRG---------GRIRVRATIE----KVDKTMLV 258

Query: 260 VSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIECKRDAVGEVVLNNL 319
           + ++PY      L+E I +  +  K++ I  + D +  D + I ++       ++ ++ L
Sbjct: 259 IRDVPYGTTTTGLMESIVKASENNKIK-IKRVVDNTAAD-VEIQVQLPPGVSPDLTMDAL 316

Query: 320 YANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTIFELRK 371
           YA T  + +   N   + N +P   ++ E+L+       +++ R    E+RK
Sbjct: 317 YAFTDCEVSISPNACVIINDKPHFLDVNELLRISTFKTVDLLKRE--LEIRK 366