Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 854 a.a., DNA gyrase subunit A from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  827 bits (2136), Expect = 0.0
 Identities = 433/891 (48%), Positives = 601/891 (67%), Gaps = 70/891 (7%)

Query: 6   KEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKK 65
           + I P+NIEDE+R +Y+DY+MSVI+ RALPDVRDGLKPVHRRVL+ M+ LG  +NK+YKK
Sbjct: 5   ERIIPINIEDEMRGAYIDYSMSVIISRALPDVRDGLKPVHRRVLYGMSELGVSYNKSYKK 64

Query: 66  SARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEV 125
           SAR+VG+V+GKYHPHGDS+VY+T+VRMAQ +SLRY LVDGQGN+GSIDGDS AAMRYTE 
Sbjct: 65  SARIVGEVLGKYHPHGDSSVYETMVRMAQEWSLRYPLVDGQGNYGSIDGDSPAAMRYTEA 124

Query: 126 RMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPH 185
           R+ +IA ELLADLDK TVD+VPN+D + + P+V+P K+PNLL+NG SGIAVGMATN+ PH
Sbjct: 125 RLKRIADELLADLDKNTVDFVPNFDDSLKEPSVMPAKLPNLLVNGTSGIAVGMATNMAPH 184

Query: 186 NLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSK 245
           NL EV++G  AYIDN  ITI ELM YI  PDFPT  +I G  G+  A++TGRG+V MR++
Sbjct: 185 NLTEVVNGITAYIDNRDITIAELMQYITAPDFPTGGIIHGYDGVKSAFETGRGRVLMRAR 244

Query: 246 AEIETDKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIE 305
           A  ET  +GKE IIV+EIPY VNKA LIEK A L+ EKK+EGIS LRDESD+DG+RIV +
Sbjct: 245 ANFETTPSGKEQIIVTEIPYMVNKATLIEKTAALINEKKIEGISDLRDESDRDGLRIVYD 304

Query: 306 CKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRT 365
            KRDA+  VVLNNLY  T LQ++FG+N VAL  G+P   NLKE+++ FV+HR EVV RRT
Sbjct: 305 LKRDAIPNVVLNNLYKYTALQSSFGVNNVALVKGRPMTLNLKELIQYFVEHRHEVVVRRT 364

Query: 366 IFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLER 425
            +EL +A++RAHILEGL +AL N+DE+I LIR +  P  A+ GLI R             
Sbjct: 365 QYELDEAKKRAHILEGLLIALDNLDEVINLIRSSRDPEVARNGLIER------------- 411

Query: 426 AGTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIA 485
                                + L+E QA+AILD+RL +LTGLE +KI  EY+++++ I 
Sbjct: 412 ---------------------FQLSEIQARAILDMRLQRLTGLERDKIQQEYEEIMKLID 450

Query: 486 ALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVVTLSHE 545
            L  IL      M++I++EL  I+  + D RRT I A+T DI  E++I  E++V+T+SHE
Sbjct: 451 YLTSILNDEGLRMQIIKDELAEIKERYGDGRRTGIEASTGDISYEDMIPEENMVITISHE 510

Query: 546 GYVKYQLLSDYEAQRRGGKG-KSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVY 604
           GY+K   L++Y +Q RGG G +     K+ D+ E L +ANTH ++L F+  G+ + +KVY
Sbjct: 511 GYIKRTSLNEYRSQSRGGVGSRGVAASKDSDFTEHLFIANTHHHMLFFTEFGRVFWLKVY 570

Query: 605 QLPLASRTARGKPIVNLLPLEENERITAILPVTEFSEDKFIF-----MATGDGTVKKTSL 659
           ++P   +T +G+ I NL+ +E+++++ A+L V +     ++        T  GT+KKT L
Sbjct: 571 EIPEGGKTTKGRAIQNLIQIEKDDKVRAVLNVHDLKNQDYVLNHNLVFITEQGTIKKTVL 630

Query: 660 DQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQ 719
           + ++  R NG+ A+++ D D L+ V +T+  SEI++  + G+ +RF E +          
Sbjct: 631 EAYSRPRTNGINAISINDGDRLLDVQLTNTSSEIVIALESGRAIRFNEDQ---------- 680

Query: 720 PVLDENGQPEIKFKGVRPMGRTAAGVRGMKLA-DGDQVVSLIVPKTEG-DVLTVTENGYG 777
                          VRPMGRTAAGVR + LA   D+VV ++  + E  D+L V+E G+G
Sbjct: 681 ---------------VRPMGRTAAGVRAVTLAGPDDKVVGMVCVENENTDLLVVSEKGFG 725

Query: 778 KRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVS 837
           KR+ L EY    RG +GV ++ V+++ G +V    V + D+ M+I  +G  +R RV E+ 
Sbjct: 726 KRSLLEEYRITNRGGKGVKTMNVTDKTGKLVAIKGVVDTDDLMIINRSGITIRLRVGELR 785

Query: 838 QVGRNTQGVTLIRTSEGESVVGLQRIDEIEESELPEGEEALVENDAPVAQD 888
            +GR TQGV LI+ +EG+ +  + ++ E+E  E  E EE L+E   P  +D
Sbjct: 786 VIGRATQGVRLIKLTEGDQISSVAKV-EVENEE--EVEELLMEQSEPSPED 833