Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 756 a.a., DNA topoisomerase IV subunit A from Pectobacterium carotovorum WPP14

 Score =  388 bits (997), Expect = e-112
 Identities = 250/700 (35%), Positives = 392/700 (56%), Gaps = 65/700 (9%)

Query: 19  SSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKSARVVGDVIGKYH 78
           ++YL+Y+M VI+ RALP + DGLKPV RR+++AM+ LG + +  +KKSAR VGDV+GKYH
Sbjct: 20  NAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNSSAKFKKSARTVGDVLGKYH 79

Query: 79  PHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDG-DSAAAMRYTEVRMSKIAHELLAD 137
           PHGDSA Y+ +V MAQPFS RY LVDGQGN+G+ D   S AAMRYTE R+SK A  LL++
Sbjct: 80  PHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSKYAELLLSE 139

Query: 138 LDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHNLGEVIDGCLAY 197
           L + TVDY PN+DGT Q P +LP ++PN+L+NG +GIAVGMAT+IPPHN+ EV    +  
Sbjct: 140 LGQGTVDYTPNFDGTMQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNVREVAAAAVML 199

Query: 198 IDNEAITIDELMDYIPGPDFPT-AALISGRKGIIDAYKTGRGKVYMRSKAEIETDKNGKE 256
           ++N   +++EL+ ++ GPDFPT A +I+ R  +   Y+ GRG V MR+       K    
Sbjct: 200 LENPKASLEELLQHVQGPDFPTEAEIITPRDEVRKLYQNGRGSVRMRA-----VWKKEDG 254

Query: 257 TIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG-MRIVIECKRDAVG-EV 314
            ++++ +P+QV+ A+++E+IA  ++ KK+  +  LRDESD +   R+V+  + + +  + 
Sbjct: 255 DVVITALPHQVSGAKVLEQIASQMRAKKLPMVEDLRDESDHENPTRLVLVPRSNRIDMDQ 314

Query: 315 VLNNLYANTQLQTTF--GINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTIFELRKA 372
           V+N+L+A T L+ ++   +NM+ LD G+P +  L E+L  ++  RR+ V RR  + L K 
Sbjct: 315 VMNHLFATTDLEKSYRVNMNMIGLD-GRPSVKGLVEILSEWLVFRRDTVCRRLNYRLEKV 373

Query: 373 RERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLERAGTDAAR 432
            +R HILEGL +A  NIDE+I +IR   T  E K  L+                      
Sbjct: 374 LKRLHILEGLLIAFLNIDEVIHIIR---TEDEPKPVLMR--------------------- 409

Query: 433 PEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIAALMHILA 492
                        ++ L+E QA+AIL+L+L  L  LE  KI  E   L +E   L  +LA
Sbjct: 410 -------------QFSLSETQAEAILELKLRHLAKLEEMKIRGEQDDLAKERDQLQALLA 456

Query: 493 STERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEE--LIAREDVVVTLSHEGYVKY 550
           S  +L  +I++E+++    + D RR+ +   +    M E   +  E V + LS  G+V+ 
Sbjct: 457 SDRKLSNLIKKEIQSDAQAYGDDRRSPLRERSEAKAMSEHDFVPSEPVTIVLSEMGWVRS 516

Query: 551 QLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVYQLPLAS 610
               D +         +    K  D    +    ++  ++   + G++Y +    LP  S
Sbjct: 517 AKGHDID--------PTGLSYKAGDSFRAVAKGKSNQPVVFIDSTGRSYALDPITLP--S 566

Query: 611 RTARGKPIVNLLPLEENERITAILPVTEFSEDKFIFMATGDG-TVKKTSLDQFANVRANG 669
              +G+P+   L       I  +L     ++D+ + MA+  G     T  D  A  RA  
Sbjct: 567 ARGQGEPLTGKLTPPPGATIEQVLMA---ADDQPLLMASDAGYGFVCTFNDLVARNRAGK 623

Query: 670 LIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESE 709
            I     +  +L  ++I   ++ +M  +  G+++ F  S+
Sbjct: 624 AIITLPDNAKALAPIEIKGDDNLLMAITAAGRMLLFPVSD 663