Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 757 a.a., DNA topoisomerase IV subunit A from Pantoea agglomerans CFBP13505 P0401

 Score =  384 bits (987), Expect = e-111
 Identities = 253/713 (35%), Positives = 391/713 (54%), Gaps = 65/713 (9%)

Query: 19  SSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKSARVVGDVIGKYH 78
           ++YL+Y+M VI+ RALP + DGLKPV RR+++AM+ LG   +  +KKSAR VGDV+GKYH
Sbjct: 20  NAYLNYSMYVIMDRALPYIGDGLKPVQRRIVYAMSELGLSASAKFKKSARTVGDVLGKYH 79

Query: 79  PHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGD-SAAAMRYTEVRMSKIAHELLAD 137
           PHGDSA Y+ +V MAQPFS RY LVDGQGN+G+ D   S AAMRYTE R+SK A  LL +
Sbjct: 80  PHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSKYAELLLGE 139

Query: 138 LDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHNLGEVIDGCLAY 197
           L + TVDY PN+DGT Q P +LP ++PN+L+NG +GIAVGMAT+IPPHNL EV    +A 
Sbjct: 140 LGQGTVDYQPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNLREVAQAAIAL 199

Query: 198 IDNEAITIDELMDYIPGPDFPT-AALISGRKGIIDAYKTGRGKVYMRSKAEIETDKNGKE 256
           ID+   T+++L+D + GPD+PT A +I+ R  I   Y+TGRG +  R+       K  + 
Sbjct: 200 IDSPKTTLEQLLDIVQGPDYPTEAEIITPRDEIRKIYQTGRGSIRQRA-----VWKKEEG 254

Query: 257 TIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG-MRIVIECKRDAVG-EV 314
             +++ +P+QV+ AR++E+IA  ++ KK+  +  LRDESD +   R+VI  + + V  + 
Sbjct: 255 EAVITALPHQVSGARVLEQIANQMRNKKLPMVEDLRDESDHENPTRLVIVPRSNRVDLDQ 314

Query: 315 VLNNLYANTQLQTTF--GINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTIFELRKA 372
           V+N+L+A T L+ ++   +NM+ LDN +P + NL E+L  ++  RR+ V RR    L + 
Sbjct: 315 VMNHLFATTDLEKSYRVNLNMIGLDN-RPAVKNLHEILTEWLVFRRDTVKRRLNHRLDRV 373

Query: 373 RERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLERAGTDAAR 432
             R HILEGL +A  NIDE+IE+IR   T  E K  L++R                    
Sbjct: 374 LRRLHILEGLLVAFLNIDEVIEIIR---TEDEPKPVLMSR-------------------- 410

Query: 433 PEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIAALMHILA 492
                         + ++E QA++IL+L+L  L  LE  KI  E  +L +E   L   LA
Sbjct: 411 --------------FGISETQAESILELKLRHLAKLEEMKIRGEQAELEKERDQLQATLA 456

Query: 493 STERLMEVIREELEAIRAGFSDARRTEI--TAATHDIDMEELIAREDVVVTLSHEGYVKY 550
           S  ++  ++++EL+A  A + D RR+ +        +   EL+  E V + LS  G+V+ 
Sbjct: 457 SERKMNTLLKKELQADSASYGDDRRSPLREREEAKALSETELVPSEPVTIVLSQMGWVRS 516

Query: 551 QLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVYQLPLAS 610
               D +         +    K  D         ++  +    + G++Y +    LP  S
Sbjct: 517 AKGHDID--------PAGLSYKAGDSYLAAARGKSNQPVAFIDSTGRSYTLDPTSLP--S 566

Query: 611 RTARGKPIVNLLPLEENERITAILPVTEFSEDKFIFMATGDGTVKKTSLDQFANVRANGL 670
              +G+P+   L       +  +L      +D+ + MA+  G     +     +    G 
Sbjct: 567 ARGQGEPLTGKLTPPPGAVVEQVLME---PDDQRLLMASDAGYGFICTFSDLVSRNRAGK 623

Query: 671 IALNLRDEDSLIGVDITDGESEIML-FSKFGKVVRFKESEETAVVDENGQPVL 722
             L L +   ++       E +++L  ++ G+++ F   E   +    G  ++
Sbjct: 624 ALLTLPENARVMTPMAVHHEDDMLLAITQAGRMLMFPVGELPQMSKGKGNKII 676