Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 895 a.a., DNA gyrase subunit A from Magnetospirillum magneticum AMB-1

 Score =  860 bits (2221), Expect = 0.0
 Identities = 463/913 (50%), Positives = 612/913 (67%), Gaps = 69/913 (7%)

Query: 7   EITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKS 66
           +ITPV IEDE++ SYLDYAMSVIV RALPDVRDGLKPVHRR+LFAMN  G  +NK ++KS
Sbjct: 11  DITPVTIEDEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILFAMNEAGYHFNKPFRKS 70

Query: 67  ARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVR 126
           AR+VGDV+GKYHPHGDSA+YD +VRMAQ FS+R  LVDGQGNFGS+DGD  AAMRYTE R
Sbjct: 71  ARIVGDVMGKYHPHGDSAIYDAMVRMAQNFSMRLPLVDGQGNFGSMDGDPPAAMRYTEAR 130

Query: 127 MSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHN 186
           +++ AH LL D+DKETVD+  NYD +   P VLP + PNLL+NGA GIAVGMATNIPPHN
Sbjct: 131 LARSAHSLLEDIDKETVDFQANYDESTHEPMVLPARYPNLLVNGAGGIAVGMATNIPPHN 190

Query: 187 LGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSKA 246
           LGEVID C AYID+  +T++ LM+ +PGPDFPT   I GR GI  A  TGRG V MR + 
Sbjct: 191 LGEVIDACCAYIDDPEVTVERLMELVPGPDFPTGGTILGRAGIRAAQLTGRGSVVMRGRV 250

Query: 247 EIETDKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIEC 306
            IE  +  +E I+V+EIPYQVNKAR++E+IAELV++KK+EGIS LRDESD+DG+R+V+E 
Sbjct: 251 HIEEVRKDREAIVVTEIPYQVNKARMLEQIAELVRDKKIEGISDLRDESDRDGVRMVVEI 310

Query: 307 KRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTI 366
           KRDA+ EVVL  LY  T LQT+FG+N +AL+ G+P++  L++++  F+  R EV+TRRTI
Sbjct: 311 KRDAIAEVVLAQLYRFTPLQTSFGVNSLALNGGRPEMMTLRDIIVAFIAFREEVITRRTI 370

Query: 367 FELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLERA 426
           FEL KAR+RAH+L GLA+A+ANIDE+I LIR A  P EA+E L+ R W +G+V  ++   
Sbjct: 371 FELGKARDRAHVLAGLAIAVANIDEVIRLIRAAPDPGEAREKLMTRAWPVGDVEPLIRLI 430

Query: 427 GTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIAA 486
                     EP   I DG Y L+E QA+AILDLRLH+LTGLE +KI DE +++  +I A
Sbjct: 431 D---------EPGRAIEDGCYRLSEVQAKAILDLRLHRLTGLERDKIGDELREIGHQIEA 481

Query: 487 LMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVVTLSHEG 546
            + IL+S  RLMEV+R EL  IR  F+  RRT I     + D+E+LIARED+VVT+++ G
Sbjct: 482 YLLILSSRPRLMEVMRGELMEIREQFATPRRTTIEENEFEADIEDLIAREDMVVTVTNTG 541

Query: 547 YVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVYQL 606
           Y+K   LS Y AQ+RGGKG+S   +K+ED++ ++ V NTH  +L FS+ G  Y++KVY+L
Sbjct: 542 YIKRVPLSAYRAQKRGGKGRSGMNIKDEDFLTQVFVVNTHTPVLFFSSTGIAYKLKVYRL 601

Query: 607 PLASRTARGKPIVNLLPLEENERITAILPVTEFSE---DKFIFMATGDGTVKKTSLDQFA 663
           PL +  ARGK +VNLLPL++ E I+ I+P+ E      D  +   T  G V++  L  F 
Sbjct: 602 PLGNPQARGKAMVNLLPLDDGETISTIMPLPEDETTWGDLHVMFVTSKGDVRRNPLSDFT 661

Query: 664 NVRANGLIALNLRDEDSLIGVDITDGES-EIMLFSKFGKVVRFKESEETAVVDENGQPVL 722
            VRANG IA+ L + + LI V     ES +++L +  GK +RF              PV 
Sbjct: 662 EVRANGKIAMKLGEGERLISVQTCSAESDDVLLATHRGKAIRF--------------PVQ 707

Query: 723 DENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSL-IVPKTEGD-------------- 767
           D       +FK      R + GVRG++L   D+V+S+ I+  T+ D              
Sbjct: 708 DVR-----EFK-----SRDSTGVRGIRLDGEDEVISMSILRHTDYDSETRDAFLKGDLPA 757

Query: 768 ------------VLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAE 815
                       +LTVTENG+GKRTS  EY   GRG  G+ ++ ++ + G VV +  V  
Sbjct: 758 DQMDKMVAEQQFILTVTENGFGKRTSAFEYRITGRGGSGIANLDMTAKTGLVVASFPVNH 817

Query: 816 GDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEI-----EESE 870
            D+ M++++ G L+R  V ++   GR TQGVTL+RT+E E VV   R+ +I     E  E
Sbjct: 818 EDDIMLVSDGGKLIRMPVDDIRIAGRKTQGVTLLRTAENERVVSAARLCDIGSNGDEPDE 877

Query: 871 LPEGEEALVENDA 883
             EG     E+ A
Sbjct: 878 TDEGAGDAAEDMA 890