Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 877 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Dickeya dianthicola ME23

 Score = 1283 bits (3319), Expect = 0.0
 Identities = 659/896 (73%), Positives = 766/896 (85%), Gaps = 31/896 (3%)

Query: 1   MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN 60
           MSDLA+EITPVNIE+EL+SSYLDYAMSVIVGRALPDVRDGLKPVHRRVL+AM+VLGNDWN
Sbjct: 1   MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN 60

Query: 61  KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120
           K YKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
Sbjct: 61  KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM 120

Query: 121 RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMAT 180
           RYTEVRMSKIAHELL+DLDKETVD+VPNYDGTEQIP V+PT+IPNLL+NG+SGIAVGMAT
Sbjct: 121 RYTEVRMSKIAHELLSDLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMAT 180

Query: 181 NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV 240
           NIPPHNL EVI+GCLAYID+E I+++ LM +IPGPDFPTAA+I+G++GI +AY+TGRGKV
Sbjct: 181 NIPPHNLSEVINGCLAYIDDENISVEGLMTHIPGPDFPTAAIINGKRGIEEAYRTGRGKV 240

Query: 241 YMRSKAEIETD-KNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDG 299
           Y+R++AE+E D K+G+ETIIV EIPYQVNKARLIEKIAELVKEK++EGISALRDESDKDG
Sbjct: 241 YIRARAEVEADAKSGRETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDG 300

Query: 300 MRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRRE 359
           MRIVIE KRDAVGEVVLN+LY+ TQ+Q +FGINMVAL  GQPK+  LKE+L  FV HRRE
Sbjct: 301 MRIVIEIKRDAVGEVVLNHLYSQTQMQVSFGINMVALHQGQPKVMTLKEILAAFVRHRRE 360

Query: 360 VVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNV 419
           VVTRRTIFELRKARERAHILEGLA+AL NID IIELIR A+TPA+AK  L+A+ W+LG+V
Sbjct: 361 VVTRRTIFELRKARERAHILEGLAIALVNIDPIIELIRHASTPADAKAALVAQAWELGSV 420

Query: 420 AAMLERAGTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQ 479
           A+MLERAG DAARPEWLEP++GI D +Y LTEQQAQAILDLRL KLTGLEHEK+LDEYK+
Sbjct: 421 ASMLERAGDDAARPEWLEPEFGIHDDRYHLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE 480

Query: 480 LLEEIAALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVV 539
           LL +IA L+ IL   ERLMEVIREEL AIR  ++D RRTEIT  + DI++E+LI+ E+VV
Sbjct: 481 LLGQIAELLFILRRPERLMEVIREELLAIREQYNDVRRTEITHNSADINIEDLISEENVV 540

Query: 540 VTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTY 599
           VTLSH+GYVKYQ LSDYEAQRRGGKGKSA ++KEED+I+RLLVANTHD IL FS+RG+ Y
Sbjct: 541 VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY 600

Query: 600 RMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSEDKFIFMATGDGTVKKTSL 659
            +KVYQLP ASR ARG+PI+NLLPLE +ERITAILPV E+ E   +FMAT  GTVKKT+L
Sbjct: 601 WLKVYQLPEASRGARGRPIINLLPLEPDERITAILPVREYEEGMNVFMATASGTVKKTAL 660

Query: 660 DQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQ 719
            +F+  R+ G+IA+NL + D LIGVD+TDG +E+MLFS  GKVVRF ES           
Sbjct: 661 TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAEGKVVRFSES----------- 709

Query: 720 PVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEGDVLTVTENGYGKR 779
                          VR MGRTA GVRG+ L + D+VVSLIVP+ EGD+LTVT+NG+GKR
Sbjct: 710 --------------AVRTMGRTATGVRGINLQNDDRVVSLIVPRGEGDILTVTQNGFGKR 755

Query: 780 TSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQV 839
           T+++EYP K R T+GV+SIKVSERNG VVGAVQV   D+ MMIT+AGTLVRTRV+EVS V
Sbjct: 756 TAVTEYPVKSRATKGVISIKVSERNGKVVGAVQVDTADQIMMITDAGTLVRTRVSEVSIV 815

Query: 840 GRNTQGVTLIRTSEGESVVGLQRIDE-IEESELPEGEEALVENDAPVAQDDDGEQE 894
           GRNTQGVTLIRT+E E VVGLQR+ E +E+ EL    +++V  D  + Q+D  E E
Sbjct: 816 GRNTQGVTLIRTAEDERVVGLQRVAEPVEDDEL----DSVVPVDGELPQEDIDEPE 867