Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 842 a.a., DNA gyrase, A subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  840 bits (2169), Expect = 0.0
 Identities = 435/883 (49%), Positives = 605/883 (68%), Gaps = 67/883 (7%)

Query: 6   KEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKK 65
           + I P+NIE+E+R +Y+DY+MSVIV RALPDVRDG+KPVHRR+LF M  LG   NK YKK
Sbjct: 7   ENIIPINIEEEMRGAYIDYSMSVIVSRALPDVRDGMKPVHRRILFGMQELGVLHNKPYKK 66

Query: 66  SARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEV 125
           SAR+VG+V+GKYHPHGDSAVY+T+VRMAQ +SLRY LVD QGNFGSIDGD+AAAMRYTE 
Sbjct: 67  SARIVGEVLGKYHPHGDSAVYETMVRMAQDWSLRYPLVDPQGNFGSIDGDNAAAMRYTEA 126

Query: 126 RMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPH 185
           R+ +IA ELL D++KETVD+  N+D + + P VLP KIP LL+NGASGIAVGMATN+ PH
Sbjct: 127 RLKRIAEELLTDINKETVDFQLNFDDSLKEPVVLPAKIPALLLNGASGIAVGMATNMAPH 186

Query: 186 NLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSK 245
            LGEVIDG +AYI+N  IT++ELM ++  PDFPT  +I G  G+  AY+TGRG+V MR K
Sbjct: 187 QLGEVIDGTIAYIENNDITVEELMKHVIAPDFPTGGIIYGYNGVKSAYETGRGRVVMRGK 246

Query: 246 AEIETDKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIE 305
           A IET   GKE II++EIPY VNKA +IEK A+L++EKK+EGISA+RDESD+ GMRIV E
Sbjct: 247 ATIETKDTGKEMIIINEIPYLVNKANMIEKTAQLIQEKKLEGISAIRDESDRRGMRIVYE 306

Query: 306 CKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRT 365
            KRDA+  VVLNNLY  TQLQT+F IN VAL  G+P   NLKE++  +V+HR EVVTRRT
Sbjct: 307 LKRDAIANVVLNNLYKQTQLQTSFSINNVALVKGRPYTLNLKELIVHYVNHRHEVVTRRT 366

Query: 366 IFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLER 425
            +ELR+A +RAHIL+G  +AL N+DE+I LIR +  P  A+ GL+               
Sbjct: 367 EYELREAEKRAHILQGYLIALDNLDEVISLIRNSRDPETARTGLME-------------- 412

Query: 426 AGTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIA 485
                               K+ LTE QA+AILD+RL +LTG+E EKI  EY++L+  I 
Sbjct: 413 --------------------KFELTEIQARAILDMRLQRLTGMEREKIQKEYEELMLLIE 452

Query: 486 ALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVVTLSHE 545
            L  IL   ER ME+I+ EL  I+  ++D RRT I     D   E++I  E+V++T+SH+
Sbjct: 453 DLKDILEKKERRMEIIKTELSEIKERYNDERRTTIEHNAEDFSYEDMIPNEEVIITVSHQ 512

Query: 546 GYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVYQ 605
           GYVK   L +Y  Q RGG G      K++DY E L  A+TH+ +L+F+ +GK + +K Y 
Sbjct: 513 GYVKRTALKEYRTQGRGGVGSRGVSTKDDDYTEYLFSASTHNYLLIFTDKGKLFWLKTYA 572

Query: 606 LPLASRTARGKPIVNLLPLEENERITAILPVTEFSED-----KFIFMATGDGTVKKTSLD 660
           +P  S+T++G+PI NL+ +E +++I +I+ VT+ +++      F+ M T +G +KKT+L+
Sbjct: 573 IPEGSKTSKGRPIQNLINIESDDKIRSIIQVTDLNDEDYIQNNFLVMVTKNGVIKKTTLE 632

Query: 661 QFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQP 720
           Q++  R+NG+IALN+R++D L+ V+ T G+S I++ +K G+ + F ES            
Sbjct: 633 QYSRPRSNGIIALNIREDDQLLNVEFTHGDSHILIAAKSGRAIHFHES------------ 680

Query: 721 VLDENGQPEIKFKGVRPMGRTAAGVRGMKLADG-DQVVSLI-VPKTEGDVLTVTENGYGK 778
                         VRPMGRTA GV+ + L+D  D+VV ++ V + E  +L V+E GYGK
Sbjct: 681 -------------AVRPMGRTATGVKAITLSDDKDEVVGMVCVNREEATLLVVSEKGYGK 727

Query: 779 RTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQ 838
           R+++ EY    RG +GV ++ V+++ GS+V    V + D+ M+I  +G ++RT V+ +  
Sbjct: 728 RSAVEEYRITNRGGKGVKAMNVTDKTGSLVAIKSVIDSDDLMIINKSGIIIRTPVSGLRI 787

Query: 839 VGRNTQGVTLIRTSEGESVVGLQRIDEIEESELPEGEEALVEN 881
           +GR TQGV LI+ +E + +  + +++++EE E+ E ++   EN
Sbjct: 788 MGRATQGVRLIKLNENDEISSVAKVEQVEE-EIEEIQDNADEN 829