Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 733 a.a., DNA topoisomerase IV subunit A from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  444 bits (1143), Expect = e-129
 Identities = 262/632 (41%), Positives = 376/632 (59%), Gaps = 62/632 (9%)

Query: 13  IEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKSARVVGD 72
           +E  L   YL YA+S I  RALPDVRDG KPVHRR+L+AM+ +  +   A +K A+VVG+
Sbjct: 18  METALSRRYLAYALSTITNRALPDVRDGFKPVHRRILYAMHQMRLNPQAAARKCAKVVGE 77

Query: 73  VIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVRMSKIAH 132
           V+G YHPHGD+++Y+ +VR+AQ F+ RY LVDGQGNFG+IDGDSAAAMRYTE +++  A 
Sbjct: 78  VMGGYHPHGDASIYEALVRLAQDFAQRYPLVDGQGNFGNIDGDSAAAMRYTECKLTPAAV 137

Query: 133 ELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHNLGEVID 192
            LL  +D+++VD+   YD  ++ P VLP   PNLL NG+SGIAVGMAT+IPPHN+GE+ID
Sbjct: 138 LLLDGIDQDSVDFRATYDDQDEEPIVLPAGFPNLLANGSSGIAVGMATSIPPHNVGELID 197

Query: 193 GCLAYIDNEAITIDELMDYIPGPDFPTAAL-ISGRKGIIDAYKTGRGKVYMRSKAEIETD 251
            C A ++    T +EL+  +PGPDFPT  + + G   I+DAY+TGRG V +R++ E E  
Sbjct: 198 ACQALLERPETTTEELVRLVPGPDFPTGGVAVEGHASILDAYETGRGGVRLRARWETEDL 257

Query: 252 KNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIECK-RDA 310
             G   IIV+E+PYQV K+RLIE +A+L++ KK   +  +RDES +D +R+++E K R  
Sbjct: 258 GRGVWRIIVTEMPYQVQKSRLIEALADLIEHKKAPLLGDVRDESAED-IRLILEPKNRTI 316

Query: 311 VGEVVLNNLYANTQLQTTFGINMVALD-NGQPKLFNLKEMLKCFVDHRREVVTRRTIFEL 369
             E+++ +L+  + L+  F INM  LD +G P++  LK+ L+ F+DHRREV+ RR+ + +
Sbjct: 317 EPEMLMESLFKLSDLEVRFPINMNVLDASGTPRVMGLKDCLRAFLDHRREVLNRRSQWRI 376

Query: 370 RKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLERAGTD 429
            +  +R H+LEGL +   N+DE+I ++R    P   K  LIAR                 
Sbjct: 377 ARVEKRLHLLEGLRIVFLNLDEVIRIVREEEQP---KAVLIAR----------------- 416

Query: 430 AARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIAALMH 489
                            + LTE QA  ILD RL +L  LE   I  E+  L EE+A L  
Sbjct: 417 -----------------FGLTEVQADFILDTRLRQLARLEEMTIEKEFNALSEELANLKA 459

Query: 490 ILASTERLMEVIREELEAIRAGFSDARRTEITAATHD---IDMEELIAREDVVVTLSHEG 546
           + +S  +  + I +ELEA+R      RRT I  A      +  E  I RE + V LS  G
Sbjct: 460 LTSSEGKQWKAISKELEAVRKALISPRRTTIAEAVDTSAFVAPEAFIPREAITVILSERG 519

Query: 547 YVKYQLLSDYEAQRRGGKGK----SATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMK 602
           ++            R  KGK    S  K KE D +  L+ A T D +L+ ++ G+ + + 
Sbjct: 520 WI------------RAAKGKVEDPSELKFKEGDQLAYLVPAYTTDKLLVAASDGRIFTIG 567

Query: 603 VYQLPLASRTARGKPIVNLLPLEENERITAIL 634
             +  LAS    G+P+  ++ L+E   I  +L
Sbjct: 568 ADK--LASGRGHGEPLRLMIDLDEKAEIINVL 597