Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 925 a.a., DNA gyrase subunit A from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  763 bits (1971), Expect = 0.0
 Identities = 420/924 (45%), Positives = 593/924 (64%), Gaps = 58/924 (6%)

Query: 7   EITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKS 66
           +I+ + IEDEL+ SYLDYAMSVIV RALPD RDGLKPVHRR+L++M+ L     ++Y K 
Sbjct: 21  DISTITIEDELKRSYLDYAMSVIVSRALPDARDGLKPVHRRILYSMHDLNMTPERSYSKC 80

Query: 67  ARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVR 126
           ARVVGDV+G++HPHGD++VY  +VRMAQPFS+  MLVDGQGNFGS+DGD  A+MRYTE R
Sbjct: 81  ARVVGDVLGRFHPHGDASVYMALVRMAQPFSMGLMLVDGQGNFGSVDGDMPASMRYTEAR 140

Query: 127 MSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHN 186
           M+  A  L+AD+DK+TVD+ PNYD  E  P VLP++IPNLL+NGA GIAVGMATNIPPHN
Sbjct: 141 MAPAAVALMADIDKDTVDFQPNYDEKELEPVVLPSRIPNLLVNGAGGIAVGMATNIPPHN 200

Query: 187 LGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSKA 246
           LGEV+D  LA +D+  +T D L+D +PGPDFPT   I GR    +A + GRG V +R +A
Sbjct: 201 LGEVVDAALALLDDPNVTDDALLDIVPGPDFPTGGEIMGRTAPRNALRDGRGSVVVRGRA 260

Query: 247 EIETDKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIEC 306
            +E  +  +E I+V+E+PYQVNK  LIE+IAE+V+EK++EGIS +RDESD+ GMRIVIE 
Sbjct: 261 SVEEIRKDREAIVVTELPYQVNKQTLIERIAEMVREKRLEGISDVRDESDRQGMRIVIEL 320

Query: 307 KRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRTI 366
           KRDA G+V+LN L+  T +Q++FG+NM+AL++G+P+   L+++L+ F+D R EVV RR  
Sbjct: 321 KRDASGDVILNQLWRYTAMQSSFGVNMLALNHGRPEQMGLRQLLQIFLDFREEVVVRRVK 380

Query: 367 FELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLERA 426
           FEL KAR+R H+L GLA+A+ANIDE+I +IR +A P EA+E L A+ W +G++ A++E  
Sbjct: 381 FELNKARDRGHVLVGLAVAVANIDEVIHIIRSSADPTEARERLQAKAWPVGDMMALVELI 440

Query: 427 GTDAARPEWLEPQYGIRDG-KYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIA 485
                     +P+  I +G K  LT++QA+AIL L L +LTGL  + I  E   L + I 
Sbjct: 441 A---------DPRTVIVEGDKIRLTDEQARAILALTLSRLTGLGRDDIFGEAHGLADTIQ 491

Query: 486 ALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVVTLSHE 545
             + IL+  + ++ +IR++L  ++  F+  RRT I     +++ E+LI RED+VVT++H 
Sbjct: 492 GHLTILSDRKNVLAIIRDDLIDVKDRFAVPRRTLIGEGDGEMEDEDLIPREDMVVTVTHG 551

Query: 546 GYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYRMKVYQ 605
           GYVK   L+ Y  Q RGGKG+S   MK+ED I  +  A+TH  +L F+T GK Y++K ++
Sbjct: 552 GYVKRVALNAYRTQHRGGKGRSGMSMKDEDAITGVFSASTHTPVLFFATNGKAYKLKTWR 611

Query: 606 LPLASRTARGKPIVNLLPLEENERITAILPVTEFSE---DKFIFMATGDGTVKKTSLDQF 662
           LPL +  +RGK  VNLLP+E  + I  +LP+ E      D  I  AT  G V++  L  F
Sbjct: 612 LPLGNPQSRGKAFVNLLPIEPGDSIMNVLPLPEDETTWGDYDIMFATSSGDVRRNKLSDF 671

Query: 663 ANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETA---------- 712
           A V   G IA+ L   D ++GV +   + +++L +  G+ +RFK  +             
Sbjct: 672 ATVNRAGKIAMKLEGSDRMVGVGLCTADDDVLLTTALGRAIRFKADDVRVFKGRDSTGVR 731

Query: 713 -VVDENGQPVLDE------NGQPEIK---FKGVRPMGRTAAGVRGMK-----------LA 751
            V  ++G  V+        +  PE +    K    M +  AG    +           +A
Sbjct: 732 GVRLQDGDEVISMAILGRVDATPEERAAYVKHANAMRKALAGAEAEEDAAAPVEAEDEVA 791

Query: 752 DGDQVVSLIVP--KTEGDVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGS-VV 808
           D    V  I      E  +LTVTE G+GKR+S  EY   GRG QG+ +  +  R G+ + 
Sbjct: 792 DAALTVERIAELGAAEQFILTVTETGFGKRSSAYEYRRTGRGGQGLTAHGLGGRAGTRLA 851

Query: 809 GAVQVAEGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEIEE 868
            A  V E D+ +++T+ G ++RTR+ +V  VGR++QGVT+ RT + E VV ++R      
Sbjct: 852 AAFPVEETDDLLLVTSGGQMIRTRIDQVRIVGRSSQGVTIFRTGKDEKVVSVER------ 905

Query: 869 SELPEGEEALVENDAPVAQDDDGE 892
             LPE   A   +DA VA ++  E
Sbjct: 906 --LPESGGA---DDADVAGEEGSE 924