Pairwise Alignments

Query, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

Subject, 985 a.a., DNA gyrase subunit A from Acinetobacter radioresistens SK82

 Score =  933 bits (2412), Expect = 0.0
 Identities = 512/958 (53%), Positives = 663/958 (69%), Gaps = 97/958 (10%)

Query: 7   EITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKAYKKS 66
           EI P+ IEDEL+ SYLDYAMSVIV RALPDVRDGLKPVHRRVL+AM+ LGND+NKAYKKS
Sbjct: 5   EIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKAYKKS 64

Query: 67  ARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVR 126
           ARVVGDVIGKYHPHGDSAVY+TIVRMAQ FSLRY LVDGQGNFGS+DGDSAAAMRYTEVR
Sbjct: 65  ARVVGDVIGKYHPHGDSAVYETIVRMAQDFSLRYQLVDGQGNFGSVDGDSAAAMRYTEVR 124

Query: 127 MSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHN 186
           M K+ HE+LADL+K+TVD+  NYDG+E+IP V+PT+IPNLLINGA+GIAVGMATN+ PHN
Sbjct: 125 MRKLTHEILADLEKDTVDWEDNYDGSERIPQVMPTRIPNLLINGAAGIAVGMATNMAPHN 184

Query: 187 LGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSKA 246
           + EV++ CLAY DN  I+++ LM+YI GPDFPT  +I G+ GI+DAY+TG+G++++R K 
Sbjct: 185 MTEVVNACLAYADNTNISVEGLMEYISGPDFPTGGIIYGKSGIVDAYRTGKGRLHIRGKY 244

Query: 247 EIETD-KNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGMRIVIE 305
             E D K G+ TI+ +EIPYQVNKAR+IE+IAELVKEKK+EGIS LRDESDKDGMRI I+
Sbjct: 245 HFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKDGMRIAID 304

Query: 306 CKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREVVTRRT 365
            KR    EVV+NNL+ NTQL+ +F INMV LDNGQPKL NLK+++  F+ HR+EVVTRRT
Sbjct: 305 LKRGENAEVVVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVVTRRT 364

Query: 366 IFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLGNVAAMLER 425
           ++ELRKARER HILEGL +ALANID+II+ I+ +A PAEA+E L+A  W  G V AMLER
Sbjct: 365 MYELRKARERGHILEGLTVALANIDDIIDAIKTSANPAEARERLLAADWAAGGVGAMLER 424

Query: 426 AGTDAARPEWLEPQ-----YGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQL 480
           AG+ + RP+ +E +     +G+    Y L+  Q  AIL+LRL++LTGLE +K+  EY ++
Sbjct: 425 AGSVSIRPDEIEGEDPSRPFGLDRDIYRLSPTQVAAILELRLNRLTGLEQDKLHAEYSEI 484

Query: 481 LEEIAALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVV 540
           L +I  L  IL     LM VI+EEL  +   + DARRTEI  +  D   E+LI  E VV+
Sbjct: 485 LGQITELTAILNDFNLLMAVIKEELVLVLQQYGDARRTEIVESRIDFSREDLIPEEQVVL 544

Query: 541 TLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYR 600
           T+S  GY K Q LSDY AQRRGG+GKSAT MKE+D+I+ L+V + H  +L F+  GK YR
Sbjct: 545 TVSQSGYAKTQPLSDYAAQRRGGRGKSATSMKEDDFIQHLIVTSNHATVLCFTNVGKVYR 604

Query: 601 MKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSEDKFIFMATGDGTVKKTSLD 660
           ++V+++P ASR +RG+P++NLLPL+ NE ITAILPV +  +     +A     VK  ++ 
Sbjct: 605 LRVFEVPQASRGSRGRPMINLLPLDANETITAILPVIDAPKKFTERLAAFKNFVKTNTV- 663

Query: 661 QFANVRANGLIALNLRD-EDSLIGVD----------------------ITDGESEIML-F 696
               ++ N +I+++L + E +L  +D                      +TD + EI++ F
Sbjct: 664 ---KLQDNPVISVHLPELETALAMLDDNADELSAELRTQLKQLCVELAVTDLDDEIIIEF 720

Query: 697 SKFGKVVRFK---------------ESEETAVVDENG----------------------Q 719
           ++  + VR                 E E+ + V  NG                      Q
Sbjct: 721 AQQAESVRKNYYVFMATASGTVKRVELEQFSNVRSNGLRAIELNEEDTLIGVTITDGEQQ 780

Query: 720 PVLDENGQPEIKF--KGVRPMGRTAAGVRGMKLA---------DGD-------------- 754
            +L  N    I+F    VR MGR+A GVRGM++A         D D              
Sbjct: 781 IMLFSNEGKAIRFAETDVRAMGRSAKGVRGMRVALAAQAEDTEDTDTDSEDEDSSDSNVV 840

Query: 755 -QVVSLIVPKTEGDVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQV 813
            ++VSL+V    G+VL  + NGYGKRT + ++PTK RG +GV++IK SERNG +VGAV +
Sbjct: 841 SRIVSLVVVPETGEVLCASANGYGKRTPVDDFPTKKRGGKGVIAIKTSERNGELVGAVAI 900

Query: 814 AEGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIRTSEGESVVGLQRIDEIEESEL 871
            E  E M+I++ GTLVRTR AEV+Q GRN QGV LIR  EGE++VG+  I+ +EE E+
Sbjct: 901 DETKELMLISDGGTLVRTRAAEVAQTGRNAQGVRLIRLGEGETLVGVVSIEAVEEDEV 958