Pairwise Alignments

Query, 761 a.a., ribonucleoside-diphosphate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 964 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score =  263 bits (672), Expect = 3e-74
 Identities = 187/684 (27%), Positives = 318/684 (46%), Gaps = 46/684 (6%)

Query: 5   LTVTKRDGRKENIDLDKIHRVITWAAEGLQNVSVSQVELRAHIQFYDGITTSDIHETIIK 64
           + +T+ DG    +D+ +++ ++T A EGL+ V    ++       YDG+  +D++  ++ 
Sbjct: 148 IRITRADGSLAPLDMGRLNTIVTEACEGLEEVDGDLIQRETLKNLYDGVALTDVNTALVM 207

Query: 65  SAADLISEETPDYQYLAARLAVFHLRKKAYGQYEPPTLLAH----------VTKMVEKGK 114
           +A  L+  E P+Y ++ ARL +  LR +     E      H          +   + KG 
Sbjct: 208 TARTLVERE-PNYSFVTARLLMDTLRAEGLNFLEVAESATHHEMADLYAKALPAYIAKGI 266

Query: 115 YDKHLLEDYTREELELMDQFIDHRRDLDFSYAAVKQLEGKYFVQNRVTGQIYESAQFLYI 174
             + L       +LE + + I+H RD  F+Y  ++ L  +YF+     G  +E  Q  ++
Sbjct: 267 EFELLNPVLATFDLEKLGKAINHERDQQFTYLGLQTLYDRYFIHK--DGVRFELPQIFFM 324

Query: 175 LVAACLFAKYPKETRLDYIKRFYDATSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSL 234
            VA  L  +  ++ + D    FY+  S+F     TP +    T   Q SSC L    D L
Sbjct: 325 RVAMGLAIE--EKQKEDRAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDL 382

Query: 235 DSINATASSIVRYVSQRAGIGINAGRIRALGSEIRGGEAFHTGCIPFYKYFQTAVKCCSQ 294
             I               G+G +   +RALGS I+G      G +PF K         +Q
Sbjct: 383 SGIYHAIHDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQ 442

Query: 295 GGVRGGAATVFYPLWHGEAESLLVLKNNRGVEENRVRHMDYGVQLNKLMYKRLVEGGNIT 354
           GG R GA   +   WH + E  + L+ N G +  R   M+    +  L  KR+ + G  T
Sbjct: 443 GGKRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWT 502

Query: 355 LFSPSDVPGLYD---AFFQDQDEFERLYVKYENDPSIKKKTVKALEIFTLLMQERASTGR 411
           LFSPS+VP L+D     F+++ E+     +Y     +  KT++A +++  ++     TG 
Sbjct: 503 LFSPSEVPDLHDLTGKAFEERYEYYEALTEYPGKVKL-FKTIQAKDLWRKMLSMLFETGH 561

Query: 412 IYIQNVDHCNTHSPFDAAVAPVRQSNLCLEIALPTSPLANVEDESGEIALCTLSAFNL-- 469
            ++   D CN  SP    V  V  SNLC EI L T+          EIA+C L + NL  
Sbjct: 562 PWLTFKDPCNLRSP-QQHVGVVHSSNLCTEITLNTN--------KDEIAVCNLGSINLPN 612

Query: 470 ----GAIESLDDFEELSDLVVRALDALLDYQDYPLPAARRSSMNRRTLGVGVINYAYYLA 525
               G +++    +   +  VR LD ++D   Y +P A+ S+   R +G+G++ +   L 
Sbjct: 613 HIVDGKLDTA-KLQRTVNTAVRMLDNVIDINYYSVPQAKNSNFRHRPVGLGIMGFQDALY 671

Query: 526 KNGVKYSDGSANGLTHRTFEAMQYHLLRASMKLAKEQGRCPLFHETNYAKGLMPIDTY-- 583
              + Y   +A     ++ EA+ Y+ ++AS  LA E+G    F+ + ++KG++P+D+   
Sbjct: 672 LQHIAYGSDAAVEFADKSMEAVSYYAIQASCDLADERGAYETFNGSLWSKGILPLDSQQI 731

Query: 584 ------KKDIDLVCAEPLHYDWDKLRHEIMEHGLRNSTLTALMPSETSSQISNATNGIEP 637
                 +K ID+   E L  DW  +R  + + G+RNS + A+ P+ T + I+  +  IEP
Sbjct: 732 LIEQRGEKYIDVDLKETL--DWAPVRARV-QKGIRNSNIMAIAPTATIANITGVSQSIEP 788

Query: 638 PRGYVSVKASKDGILKQVVPEFTR 661
               + VK++  G    + P   R
Sbjct: 789 TYQNLYVKSNLSGEFTVINPYLVR 812