Pairwise Alignments

Query, 761 a.a., ribonucleoside-diphosphate reductase subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 1223 a.a., ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent from Magnetospirillum magneticum AMB-1

 Score = 52.8 bits (125), Expect = 1e-10
 Identities = 61/247 (24%), Positives = 90/247 (36%), Gaps = 32/247 (12%)

Query: 445 PTSPLANVEDESGEIALCTLSAF-NLGAIESLDDFEELSDLVVRALDALLDYQDYPLPAA 503
           P S    ++D +  +A   L  F N      +D F     L    L+  +    +P P  
Sbjct: 476 PCSEYMFLDDTACNLASLNLLCFRNEDGSFDVDGFRHACRLWTMVLEISVLMAQFPSPKI 535

Query: 504 RRSSMNRRTLGVGVINYAYYLAKNGVKYSDGSANGLTHRTFEAMQYHLLRASMKLAKEQG 563
              S   RTLG+G  N    L  +G+ Y       LT      M       S  +A+E G
Sbjct: 536 AELSYEFRTLGLGYANVGGLLMASGIPYDSDKGRALTGAITALMTGEAYATSADMAEELG 595

Query: 564 RCPLFHETNYA-------------------KGL----MPIDTYK-KDIDLVCAEPLHYDW 599
               F +   A                   +GL    +P+D     D  L+ A      W
Sbjct: 596 AFEGFEKNRAAMMRVIRNHRRAAHGMGTGFEGLSVTPVPLDAANCPDAPLLAAS--RQAW 653

Query: 600 DKLRHEIMEHGLRNSTLTALMPSETSSQISNA-TNGIEPPRGYVSVKASKDG----ILKQ 654
           D+   +  +HG RN+  T + P+ T   + +  T GIEP    V  K    G    I+ +
Sbjct: 654 DEALAKGEKHGFRNAQATVVAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINR 713

Query: 655 VVPEFTR 661
           +VPE  R
Sbjct: 714 MVPEALR 720



 Score = 27.7 bits (60), Expect = 0.004
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 252 AGIGINAGRIRALGSEIRGGEAFHTGCIPFYKYFQTAVKCCSQGG-VRGGAATVFYPLWH 310
           +G G N  R+R  G ++ GG    +G + F K    A      GG  R  A  V   + H
Sbjct: 229 SGTGTNFSRLRGEGEKLSGG-GRSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDVDH 287

Query: 311 GEAESLLVLKNNRGVEENRVRHMDYGVQL 339
            + E  +  K     EE +V  +  G +L
Sbjct: 288 PDIEKFISWKVR---EEQKVAALVAGSRL 313