Pairwise Alignments

Query, 377 a.a., ribonucleotide-diphosphate reductase subunit beta from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., Ribonucleotide reductase of class Ia (aerobic), beta subunit (EC 1.17.4.1) from Sphingobium sp. HT1-2

 Score = 73.9 bits (180), Expect = 6e-18
 Identities = 68/303 (22%), Positives = 125/303 (41%), Gaps = 38/303 (12%)

Query: 42  EKQLSFFWRPEEVDVSSDRIDYG-KLPDHEKHIFISNLKYQTLLDSIQGRSPNVALLPLV 100
           ++Q    W PEEV +  D  D+  KL DHE+++     ++ T  D       +     + 
Sbjct: 23  KRQQQLHWLPEEVPLGEDCRDWAQKLSDHERNLLTQIFRFFTQADVEVQDCYHEKYGRVF 82

Query: 101 SLPELETWIETWSFSETIHSRSYTHIIRNIVNDPAVVFDDIVENEH-IIKRAKDIAHYYD 159
              E++  +  +S  ET+H  +Y+H++  I          + E+E+    + K++   +D
Sbjct: 83  KPTEIKMMLTAFSNMETVHIAAYSHLLDTI---------GMPESEYSAFLQYKEMKDKHD 133

Query: 160 DLIELTNDYHRYGEGQHQINGETITVSLKELKKKLYLCLMSVNALEAIRFYVSFACSFAF 219
            L +   D             E I  +L           M     E ++ + SFA    F
Sbjct: 134 YLAQFGVD-----------TDEDIAKTLA----------MFGGFTEGLQLFASFAMLMNF 172

Query: 220 AERELMEGNAKIIKLIARDEALHLTGTQHMLNLLRNGMDDFTFLQVAEECKQESFDLFKE 279
                M+G  +I+    RDE LH  G   + +      D  T        K +  D+ ++
Sbjct: 173 PRFNKMKGMGQIVTWSVRDETLHCEGIIKLFHSFVKERDCLT-----ASVKDDIMDMCQK 227

Query: 280 AAEQEKEWAEYLFKDGSMIGLNKDILCQYVEYITNIRMQAVGLEPAYPAATNNPIPWINA 339
               E  + + +F+ G + G+    + +YV YI + R+  +GL+P Y     +P+PW+  
Sbjct: 228 TVRIEDAFVDLVFEMGPVPGMTPKDIKKYVRYIADWRLGQLGLKPIY-MIDEHPLPWLTP 286

Query: 340 WLS 342
            L+
Sbjct: 287 LLN 289