Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  228 bits (580), Expect = 8e-64
 Identities = 141/354 (39%), Positives = 204/354 (57%), Gaps = 6/354 (1%)

Query: 189 FATLIVTLVMIGLGVVI----SRAVIQPLDTIKDVMKKVAQG--DLTAQIPVLGKDELGI 242
           F   I  L++ G+G+++       + +PL  +  ++  +AQG  DLT ++     DELG 
Sbjct: 359 FGMTIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGA 418

Query: 243 VAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQ 302
           +A   N  +  +   + + V S   V++++   A  A  T+Q V  Q  ++ Q+ATA+++
Sbjct: 419 IANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHE 478

Query: 303 MTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEG 362
           MTAT  DVA +A   A+    A + A+ G + V  +  SI AL+ E+G A   V  L + 
Sbjct: 479 MTATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKD 538

Query: 363 VMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEI 422
              I+ + + I GI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVRNLA +T  +T+EI
Sbjct: 539 SENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEI 598

Query: 423 QTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAA 482
           QTMI +LQQ        M+ SQ+    SV  A  A   L  I   +  ++D  TQIA+AA
Sbjct: 599 QTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAA 658

Query: 483 EEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           EEQSAVAE++NRNV  I   A E++  A   +  S  L  L+ Q  + +  FK+
Sbjct: 659 EEQSAVAEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712