Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  213 bits (541), Expect = 2e-59
 Identities = 127/318 (39%), Positives = 183/318 (57%)

Query: 219 VMKKVAQGDLTAQIPVLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASS 278
           +M KVA GD+T       +DELG + Q  N ++A +HD +     + S V   A ++ + 
Sbjct: 359 MMDKVAAGDMTVTFVAQSRDELGDLGQVFNGTVAKIHDLIERVGHTVSQVELQAGQVETV 418

Query: 279 AEETSQAVVSQRDQLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSS 338
           + +++QAV  QR Q+ Q+ATAMNQM++T  +VA  A          + E   G   V S 
Sbjct: 419 SAQSNQAVSGQRMQIEQVATAMNQMSSTAQEVARSAAAAVSSAHSVNDETVSGRSLVQSQ 478

Query: 339 VDSIRALSVELGVATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQG 398
             SI  L+ E+  +   +N+L      IS V  VI  I+EQTNLLALNAAIEAARAG+QG
Sbjct: 479 QGSIARLATEIDQSVQVINQLATDSQSISSVLEVIKSIAEQTNLLALNAAIEAARAGEQG 538

Query: 399 RGFAVVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAG 458
           RGFAVVADEVR LA RT HST+EI+ MI+RLQ    +   AM  S  +A+ +V  +E   
Sbjct: 539 RGFAVVADEVRTLARRTQHSTEEIEQMISRLQSGVAAAVKAMGSSHDMASGTVGQSERVQ 598

Query: 459 SDLSLIVNHIQHVSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESE 518
             L  I+  +  + D+  QIA A E+Q+AVA ++++N+  IN A    ++ A      S 
Sbjct: 599 QALENILGAVGMIVDQNQQIAAAVEQQTAVAHDIDQNIVEINRAGEHAAEGAYQTEAASR 658

Query: 519 KLADLSRQLDQKLTAFKL 536
           +L+    +L Q + AF++
Sbjct: 659 QLSLQVIELKQLIGAFRV 676