Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  236 bits (601), Expect = 3e-66
 Identities = 156/469 (33%), Positives = 266/469 (56%), Gaps = 33/469 (7%)

Query: 80  ALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPGKDTEGQFWFTMIDLARNGQQGSL 139
           A+   G  Y  ++++    V HP  QDL+ +    P ++   Q   + +++A   +  SL
Sbjct: 192 AIEVPGKGYAILVNQKGKIVAHPT-QDLILK----PTEEMSAQLTISKLNIA--AKDHSL 244

Query: 140 IYPWKNQQGNPADKLSFVNGFAPWGWILGSGMLLDDIEHAVYQQFLRMGFATLIVTLVMI 199
                +  G   DK+      A   W+L   M     +  V +Q L      +++  + I
Sbjct: 245 FQ--LSMDGR--DKVLMAEEVANTDWLLVMVM-----DKGVLEQPLN----DMLMVQIGI 291

Query: 200 GLGVVISRAVI---------QPLDTIKDVMKKVAQGD--LTAQIPVLGKDELGIVAQRIN 248
           GLG+++  A++           L  I + +  +A+GD  LT ++ V  +DE+G++A + N
Sbjct: 292 GLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFN 351

Query: 249 NSIAAVHDALVESVQSAS-SVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATV 307
             +  +H  +V++V+  S ++ + A   A+SA + S+ + +Q+D+++ +ATA+ +M +  
Sbjct: 352 KFVDRLHQ-MVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASAT 410

Query: 308 ADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQIS 367
           A++A +AE+TA++   + +    G   +  S  SI  L+ EL  A   +++L+    +IS
Sbjct: 411 AEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEIS 470

Query: 368 EVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMIN 427
            + S I GI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR L+ RTH ST+EIQT I 
Sbjct: 471 TILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIA 530

Query: 428 RLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSA 487
            LQ++  +  S M +S  L   SVA     G+ L  I   IQ +SD ATQIA+AAEEQS 
Sbjct: 531 GLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSL 590

Query: 488 VAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           V  ++N N   + + + ++++ A    ++++ L  ++++L+++++ FKL
Sbjct: 591 VTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639