Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  233 bits (594), Expect = 2e-65
 Identities = 140/353 (39%), Positives = 205/353 (58%), Gaps = 2/353 (0%)

Query: 186 RMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGD--LTAQIPVLGKDELGIV 243
           RM   TL V  + I +G+ ++ ++  P++ I      + +GD  L+ +I V G DE+  +
Sbjct: 292 RMMLTTLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQL 351

Query: 244 AQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQM 303
           ++  N  I  +H ++ +  Q++  +  AA  ++  A  T      QRDQ  Q+ TA+NQM
Sbjct: 352 SKGFNGFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQM 411

Query: 304 TATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGV 363
            AT++++A +A   A     AS  A+ G   V+ + ++I  L+ ++      V +L    
Sbjct: 412 GATISEIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTT 471

Query: 364 MQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQ 423
            +I  +   I GISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRT  ST+EIQ
Sbjct: 472 QEIGSILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQ 531

Query: 424 TMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAE 483
            MIN+LQ  A +  SAM   + +    VA ++ A   L  I + I  +SD+ TQ+ATA E
Sbjct: 532 KMINQLQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATE 591

Query: 484 EQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           EQS V   +N+N+  IN      +  A  LA+ S+ L +LS +LD+ +  FKL
Sbjct: 592 EQSTVVHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFKL 644