Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  252 bits (643), Expect = 3e-71
 Identities = 172/551 (31%), Positives = 280/551 (50%), Gaps = 17/551 (3%)

Query: 1   MLKLENIKVSYKLAAIVIVGIVGFLSLLFISANALKENLVAEREARLKAVIQSTLSQVAY 60
           +L L  I +    A ++ V     LS L       + +L+  ++  L+A +   ++ V  
Sbjct: 16  LLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAYLMMGVTAVKP 75

Query: 61  LNQTLPKEQAQEQAKALINALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPGKDTE 120
           L ++    + Q QAK ++ A+RFD + Y F  D      +H I+ +L G+ +     +  
Sbjct: 76  LYESDKAGENQAQAKQILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNLYGMKDENG 135

Query: 121 GQFWFTMIDLARNGQQGSLIYPWKNQQGNP-ADKLSFVNGFAPWGWILGSGMLLDDIEHA 179
                 +ID ++ G  G L + W     N  A KL +      W W+LG+G+ +DD++  
Sbjct: 136 VAVIAGLIDASKTGD-GFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYIDDVDTQ 194

Query: 180 V-----------YQQFLR-MGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQG- 226
           V           Y Q +  +G + + +   +I + V++SR  I PL  +   ++ VA G 
Sbjct: 195 VAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRG-IAPLQHVVSSLQAVAAGG 253

Query: 227 -DLTAQIPVLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQA 285
            DLTA+I V  +DE+G VA+  N  +  +H  + +   SA++V  AA  +     + S  
Sbjct: 254 GDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHK 313

Query: 286 VVSQRDQLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRAL 345
           +     +  ++  A+ +M+AT  +VA +   TA+    A+ +  +  K+V+ ++D I  L
Sbjct: 314 MDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGEL 373

Query: 346 SVELGVATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVA 405
             E+   +  V  L +   +I++V  VI  I+EQTNLLALNAAIEAARAG+QGRGFAVVA
Sbjct: 374 VNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVA 433

Query: 406 DEVRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIV 465
           DEVR+LASRT +ST EI  M+N L Q       +M  SQ     +   +      L+ I 
Sbjct: 434 DEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGIS 493

Query: 466 NHIQHVSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSR 525
             +  + D   Q A+AAE+QSAVAE++N+N+  I     E+S++       S  L+   +
Sbjct: 494 KAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQ 553

Query: 526 QLDQKLTAFKL 536
           Q+   +  FKL
Sbjct: 554 QMGTLVGHFKL 564