Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  228 bits (580), Expect = 7e-64
 Identities = 140/348 (40%), Positives = 204/348 (58%), Gaps = 4/348 (1%)

Query: 193 IVTLVMIGLGVV----ISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDELGIVAQRIN 248
           + T++ + LG++    I+R +I PL       ++VA GDLT  + V  +DELG +   ++
Sbjct: 291 VATVLALALGLLAAWAITRQIIIPLRQTLRAAERVASGDLTQSLQVQRRDELGQLQASMH 350

Query: 249 NSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVA 308
                + + +       + +A AA  +++  E+TS  V +Q+ +  Q+ATAMNQMTATV 
Sbjct: 351 RMTQGLRELIGGIGDGVTQIASAAEELSAVTEQTSAGVNNQKVETDQVATAMNQMTATVH 410

Query: 309 DVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISE 368
           +VA +AE  +   L A ++A  GD+ V  +V  I  L+ E+  +++ +N LK    +I  
Sbjct: 411 EVARNAEQASEAALMADQQAREGDRVVGEAVAQIERLASEVVNSSEAMNLLKTESDKIGS 470

Query: 369 VTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINR 428
           V  VI  +++QTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA RT  ST+EI+ +I  
Sbjct: 471 VLDVIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQQSTEEIEELIAG 530

Query: 429 LQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAV 488
           LQ      AS M  S+ L  +SV     AGS L  I   +  +     QIATAAEEQ+AV
Sbjct: 531 LQSGTQRVASVMDNSRQLTDSSVELTRRAGSSLETITRTVSSIQAMNQQIATAAEEQTAV 590

Query: 489 AEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           AEE+NR+V  + D + + S A+   A  S +LA L   L   +  F+L
Sbjct: 591 AEEINRSVMNVRDISDQTSAASEETASSSVELARLGTHLQGLVGRFRL 638