Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  273 bits (699), Expect = 9e-78
 Identities = 178/545 (32%), Positives = 285/545 (52%), Gaps = 10/545 (1%)

Query: 1   MLKLENIKVSYKLAAIVIVGIVGFLSLLFISANALKENLVAEREARLKAVIQSTLSQVAY 60
           M  L ++ +S +L  I++V +   + L  +    +  +L   +  + + V+Q+    +AY
Sbjct: 1   MNTLRSMSISRRLWLILVVAVAMLVVLGLLMLRQIHGDLYQAKAEKTRHVVQTAAGVLAY 60

Query: 61  LNQ-----TLPKEQAQEQAKALINALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNP 115
                   TL +E AQ+QA  ++ ALR+D ++Y ++ D     ++HP    L  Q + + 
Sbjct: 61  YQGLEAAGTLSREAAQQQALQVVRALRYDHDDYFWINDLGPKMIMHPANPKLDDQDL-SA 119

Query: 116 GKDTEGQFWFT-MIDLARNGQQGSLIYPW-KNQQGNPADKLSFVNGFAPWGWILGSGMLL 173
            +D +G   F  M+ LAR    G + Y W K     P  K S++  F PWGWI+GSG+ +
Sbjct: 120 IRDPDGFAVFNEMVALARQQDAGPVNYRWPKPGASEPVAKTSYIQLFKPWGWIIGSGVYV 179

Query: 174 DDIEHAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQG--DLTAQ 231
           DD++    +Q        + + L+M  + ++I+R++ +PL      M  +A G  DLT +
Sbjct: 180 DDVQAEFARQLRDASLVGVGIALLMALVVMLIARSIARPLQEAVQAMGNIASGESDLTRR 239

Query: 232 IPVLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRD 291
           +   G DE+  + +  N     +   + +   +A ++A++A  +  +A    Q    Q  
Sbjct: 240 LDTHGSDEITHLGEHFNRFNGKLQGVVGQLQGAAHALAQSAGHVGDNAGAAQQRSAQQSL 299

Query: 292 QLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGV 351
           Q+ Q+ATA+N++T  V DVA  AE  A +   A ++   G + +H S+  I  LS+ +  
Sbjct: 300 QMDQVATAVNEVTYAVQDVAKTAEQAAGEMRTAQQQVTHGQQAIHGSLAQIDRLSLTIDE 359

Query: 352 ATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNL 411
           A   +  L     +I  V  VI  I+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR L
Sbjct: 360 AVQVIRDLAGHSTRIGGVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLL 419

Query: 412 ASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHV 471
           A RT  ST EI TMI  LQ  + +   A+  S   +  +V  A  AG+ L  I   + ++
Sbjct: 420 AQRTAQSTAEIHTMIEHLQSQSDAAVKAIDTSSEASRQTVEQAREAGASLDAINQVLNNL 479

Query: 472 SDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKL 531
           +     IA+A  +QS V EE+NRNV      + + + AA   ++    L  LS +L+Q L
Sbjct: 480 TALNASIASATLQQSHVVEEINRNVLDTAGLSQQTADAARQSSDAGVALGRLSEELEQLL 539

Query: 532 TAFKL 536
             F++
Sbjct: 540 RQFRV 544