Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., Methyl-accepting chemotaxis protein McpQ from Pseudomonas sp. DMC3

 Score =  212 bits (539), Expect = 4e-59
 Identities = 136/361 (37%), Positives = 215/361 (59%), Gaps = 17/361 (4%)

Query: 181 YQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDEL 240
           +  F++M   T +  ++ +   VVISR +  PL    D+ +++A+GDLT Q     KDEL
Sbjct: 289 HSAFIQMAVLTALALVIGLLASVVISRQITAPLALTVDLARRIAKGDLTVQARSARKDEL 348

Query: 241 GIVAQRINNSIAAVHDALVESV-QSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATA 299
           G + Q     +A   + LV+ +    + ++ +A ++++ +E+TS  V  Q+ ++ Q+ATA
Sbjct: 349 GDL-QNAMQEMAQNLNTLVQGIGNGVTQISTSAEKLSAMSEQTSAGVRQQKSEVDQVATA 407

Query: 300 MNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSV---ELGVATDQV 356
           M++M +TV +VA       R+T DAS  A L D+        ++  +V   EL +A +++
Sbjct: 408 MHEMASTVQEVA-------RNTTDASAAATLADQQARHGSTVVKQATVQISELAMAIEEL 460

Query: 357 ----NKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLA 412
               N L +   QI +V  VI  ++EQTNLLALNAAIEAARAG+QGRGFAVVADEVR+LA
Sbjct: 461 GGAMNVLTQDSEQIGKVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA 520

Query: 413 SRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVS 472
            RT  ST EI+ +I  LQQ   + A+ M  S+    ++V  A+ A   ++ I   I  + 
Sbjct: 521 QRTQDSTKEIEALIVTLQQGTQAAATLMTSSRERTLDTVVLAQKAELAITEINQSIGTIQ 580

Query: 473 DKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLT 532
           + + QI+ AAE+QSAVA+E+NR++  + D A + + A+   A  + +LA L + L Q++T
Sbjct: 581 EMSLQISAAAEQQSAVADEINRSIVSVRDVADQSAVASEESAAATIELASLGQDL-QRMT 639

Query: 533 A 533
           A
Sbjct: 640 A 640